Gene LACR_1413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1413 
Symbol 
ID4434067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp1326392 
End bp1327282 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content30% 
IMG OID639667140 
Producttranscriptional regulator 
Protein accessionYP_809350 
Protein GI116512134 
COG category 
COG ID 
TIGRFAM ID[TIGR01716] transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00403461 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAA AATATGGAGA TTGTTTTAAA AAGTTGCGAA ACCAAAAGAA TTTAGGGTTA 
TCATACTTTA GTAAACTTGG AATAGACCGT TCAAATATAT CTAGATTTGA ACATGGAAAA
TGTATGATGA GTTTTGAGCG TATAGATTTG ATGTTAGAAG AAATGCAAGT TCCGTTATCT
GAGTACGAAT TGATAGTAAA TAATTATATG CCGAATTTCC AAGAATTTTT TATATTAGAA
TTGGAAAAAG CTGAATTTAT CCAAAATCGA GATAAAATAA AAGAGTTGTA TTCTGAAGTC
AAAGAAACGG GGAATTATTT ACTGACGATT ACTGTGAAAA CGAAGCTTGG GAATATAAGT
CAGACAGAAG TTAAGGAAAT TGAAGCTTAT CTTTGCAATA TTGAAGAGTG GGGATATTTT
GAACTTACTT TATTTTATTT TGTATCTGAT TATCTCAATG TCAATCAATT AGAATTGCTG
CTTTTTAATT TTGATAAAAG ATGTGAAAAT TACTGTAGAG TCTTAAAATA TAGAAGGAGA
CTATTGCAAA TAGCCTATAA AAGTGTTGCG ATATACGCGG ACAACGGAGA AAGAAAAAAA
GCCGAAAATA TTTTAGAAAT GACTAAAAAA TATCGAACTG TGGGAGTCGA TTTATATTCA
GAAGTATTAA GACATCTTGC TAGAGCTATC ATTATTTTTA ATTTTGAAAA TGCAGGGGTT
GGGGAAGAAA AAATAAATTA TGCTCTTGAG ATTTTGGAAG AATTTGGAGG AAAGAAGATA
AAAGAATTCT ATCAGAATAA AATGGAAAAG TATTTGAACA GCTCAAAAGA GATTTTCTTT
ATTCTGGAGC ATATACTAGA GGGTGAAGAT AGGTTGTCTG AAGCATTATA A
 
Protein sequence
MYKKYGDCFK KLRNQKNLGL SYFSKLGIDR SNISRFEHGK CMMSFERIDL MLEEMQVPLS 
EYELIVNNYM PNFQEFFILE LEKAEFIQNR DKIKELYSEV KETGNYLLTI TVKTKLGNIS
QTEVKEIEAY LCNIEEWGYF ELTLFYFVSD YLNVNQLELL LFNFDKRCEN YCRVLKYRRR
LLQIAYKSVA IYADNGERKK AENILEMTKK YRTVGVDLYS EVLRHLARAI IIFNFENAGV
GEEKINYALE ILEEFGGKKI KEFYQNKMEK YLNSSKEIFF ILEHILEGED RLSEAL