Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1406 |
Symbol | gltD |
ID | 4434060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1314694 |
End bp | 1316133 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639667134 |
Product | glutamate synthase subunit beta |
Protein accession | YP_809344 |
Protein GI | 116512128 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGATC CAAATGGATT TTTAAATTAT CCAAGAAATG ATAATCCTTA CCGTGAATTA GCGGAGCGGA TAAAAGATTT TGCTGAATTG CAAGTTCCCT TATCTACTGA AGAACGACAA AAACAAGCGG CACGTTGTAT GCATTGTGAT GTTCCTTTTT GTCATCAAGG GATATTTTAT GGGGGCAAAC GAGCTGTCTC AGGCTGTCCA AATGATAATC ATATTCCAGA GTGGAATGAT TTGATTTATC GCGGTCTGCA AAGAAAAGCT TATGAACGCT TGATTTTAAC CAATCCATTT CCAGAATTCA CTGGACGAGT CTGTCCGGCT CCTTGTGAAA AATCTTGTAC CGAGGCCTTA AACGGTGCAG GAGTAACCAT TAAAGATAAT GAGCGATTCT TAGGTGATTT AGGAAATAAT GAAGGTTGGG TAGCTGAAAT TGGCAAAGCG GCAAAAGCAA CAGGTTATAA AATAGCGATT ATTGGGTCTG GACCTGCGGG TCTGTCAGCT GCTTGGCGTC TCAATCAATT GGGACATAGC GTTACTGTTT TTGAAAAATC AGATCGTTTG GGTGGCTTAT TGATGTACGG CATTCCAAAT ATGAAATTGG ATAAAAAAGT CGTTCAAAAA CGGATTGATT TAATGACAGA ACTTGGCGTG ACTTTTGTCA CAAATAGTGA AATTGGAAAA ACAATCAGCT ATGAAGAGCT GTCAGTAAAT TTTGATCGAA TTATTCTGGC GATTGGAGCA GGAGTTCCTC GTGATTTAAA AATTTCAGGT CGTGAATTGT CAGGTATTCG TTTTGCGATG GATTTTTTGA CAGAAACAAC TAAAAAAGTG TTGGAGCATG GCGAAAAAAA TATTGCCCAA TCTCTTAAAG GAAAAAAAGT TGTGGTCATT GGAGGTGGAG ATACAGGAAA TGACTGTATT GGGACGGCAG TGCGCTTGGG TGCTGAATCG GTTCAACAAC TTGAAATTAC ACCGAGTCTA CCAACTAATC GCTTAGAAAA CAATCCCTGG CCTGAATGGC CAATGACCTT AAGAGAAGGT TATGGGCAAC AAGAAGCTCA ATTTGTAGGA AATTCAGATT TGACGACTTA TCAGATGACA GCCACAGCTT TTAAAGCTGA TGAAAATGGT CATCTAAAAG GCTTACAAGT GGCAAAAGTC GGTCCAGATT TCAGAGCAAT TGAAGGTAGT GAGCAATTGA TTGAAGCAGA TTTAGTCTTG ATTGCGATGG GATTTGTGGG TACGGACACA GGCTTGCTTG ATAAATTTGG TGTTCAAGAA ATTTATGATG ATTATCGAAC AAACAATGAT AAAGTACTTG TCGCGGGTGA TACTAGACGC GGTCCTTCTT TAGTCATTTG GGCGATTAGA GAAGGCCGTA AAACCGCTGA AATTGTTGAC GAAGAGCTAC TGAAAGTAGC CACGGCATAA
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Protein sequence | MADPNGFLNY PRNDNPYREL AERIKDFAEL QVPLSTEERQ KQAARCMHCD VPFCHQGIFY GGKRAVSGCP NDNHIPEWND LIYRGLQRKA YERLILTNPF PEFTGRVCPA PCEKSCTEAL NGAGVTIKDN ERFLGDLGNN EGWVAEIGKA AKATGYKIAI IGSGPAGLSA AWRLNQLGHS VTVFEKSDRL GGLLMYGIPN MKLDKKVVQK RIDLMTELGV TFVTNSEIGK TISYEELSVN FDRIILAIGA GVPRDLKISG RELSGIRFAM DFLTETTKKV LEHGEKNIAQ SLKGKKVVVI GGGDTGNDCI GTAVRLGAES VQQLEITPSL PTNRLENNPW PEWPMTLREG YGQQEAQFVG NSDLTTYQMT ATAFKADENG HLKGLQVAKV GPDFRAIEGS EQLIEADLVL IAMGFVGTDT GLLDKFGVQE IYDDYRTNND KVLVAGDTRR GPSLVIWAIR EGRKTAEIVD EELLKVATA
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