Gene LACR_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1254 
Symbol 
ID4433253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp1168274 
End bp1169047 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content37% 
IMG OID639666994 
ProductHAD family sugar phosphatase 
Protein accessionYP_809204 
Protein GI116511988 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0647] Predicted sugar phosphatases of the HAD superfamily 
TIGRFAM ID[TIGR01457] HAD-superfamily subfamily IIA hydrolase, TIGR01457
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0106686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATA AAAAATATGG TGGTTACTTG ATTGACCTTG ATGGAACAAT TTACTTAGGT 
AATAAACGGA TTCCTGCCGG TGAAAATTTC ATTCACCGTC TGCAAGAAGC CAAAATACCT
TATCTTTTAG TGACTAATAA CACCACTAAG ACACCGCGCG TGGTTCAAAA ACGTTTGAGT
CAGCACTTTA ATATTGAGAC TCCACTTGAA ACAATTTATA CTGCAAGTCT AGCAACTGTT
GATTATATGA ACGATTTGGG TTTAGAAAAA ACAGTCTATA TTATTGGTGA AGATGGACTA
AAAGAGGCAA TCTATGAAGC TGGTTATAAA AAAGACCGTG AAAATCCAGC TTATGTTGTT
GTTGCTTTAG ATACTGATTT AACTTATGAA ATGTTGGTTT TGGCGACGCT TGCCATTCAT
AAGGGGGCAA AATTTATTGG AACAAATCCA GATTTAAACT TACCAAATGA ACGTGGTTTG
ACTCCCGGTG CTGGAGCATT GATTAAAATG CTTGAAGCGG CAACACGAGT TGAAGCGACA
ATTATTGGGA AACCTGAAGC AATTATTGCT GACAAAGCCG TTGAAAAACT CGGACTTCCT
AAGTCAGACT TATTGATGGT CGGAGATAAT TATCTGACAG ATATTCATAC AGGAATTAAT
AATGGTATTG ATAGTCTACT TGTGACGACA GGATTTACCA AAGCTGAAGA AGTACCAAAC
CTTCCAGTTC CACCAACTTA TGTGGTGTCT AGTTTAAACG ATTGGGAAGT CTAA
 
Protein sequence
MTNKKYGGYL IDLDGTIYLG NKRIPAGENF IHRLQEAKIP YLLVTNNTTK TPRVVQKRLS 
QHFNIETPLE TIYTASLATV DYMNDLGLEK TVYIIGEDGL KEAIYEAGYK KDRENPAYVV
VALDTDLTYE MLVLATLAIH KGAKFIGTNP DLNLPNERGL TPGAGALIKM LEAATRVEAT
IIGKPEAIIA DKAVEKLGLP KSDLLMVGDN YLTDIHTGIN NGIDSLLVTT GFTKAEEVPN
LPVPPTYVVS SLNDWEV