Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1254 |
Symbol | |
ID | 4433253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 1168274 |
End bp | 1169047 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639666994 |
Product | HAD family sugar phosphatase |
Protein accession | YP_809204 |
Protein GI | 116511988 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
TIGRFAM ID | [TIGR01457] HAD-superfamily subfamily IIA hydrolase, TIGR01457 [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0106686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATA AAAAATATGG TGGTTACTTG ATTGACCTTG ATGGAACAAT TTACTTAGGT AATAAACGGA TTCCTGCCGG TGAAAATTTC ATTCACCGTC TGCAAGAAGC CAAAATACCT TATCTTTTAG TGACTAATAA CACCACTAAG ACACCGCGCG TGGTTCAAAA ACGTTTGAGT CAGCACTTTA ATATTGAGAC TCCACTTGAA ACAATTTATA CTGCAAGTCT AGCAACTGTT GATTATATGA ACGATTTGGG TTTAGAAAAA ACAGTCTATA TTATTGGTGA AGATGGACTA AAAGAGGCAA TCTATGAAGC TGGTTATAAA AAAGACCGTG AAAATCCAGC TTATGTTGTT GTTGCTTTAG ATACTGATTT AACTTATGAA ATGTTGGTTT TGGCGACGCT TGCCATTCAT AAGGGGGCAA AATTTATTGG AACAAATCCA GATTTAAACT TACCAAATGA ACGTGGTTTG ACTCCCGGTG CTGGAGCATT GATTAAAATG CTTGAAGCGG CAACACGAGT TGAAGCGACA ATTATTGGGA AACCTGAAGC AATTATTGCT GACAAAGCCG TTGAAAAACT CGGACTTCCT AAGTCAGACT TATTGATGGT CGGAGATAAT TATCTGACAG ATATTCATAC AGGAATTAAT AATGGTATTG ATAGTCTACT TGTGACGACA GGATTTACCA AAGCTGAAGA AGTACCAAAC CTTCCAGTTC CACCAACTTA TGTGGTGTCT AGTTTAAACG ATTGGGAAGT CTAA
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Protein sequence | MTNKKYGGYL IDLDGTIYLG NKRIPAGENF IHRLQEAKIP YLLVTNNTTK TPRVVQKRLS QHFNIETPLE TIYTASLATV DYMNDLGLEK TVYIIGEDGL KEAIYEAGYK KDRENPAYVV VALDTDLTYE MLVLATLAIH KGAKFIGTNP DLNLPNERGL TPGAGALIKM LEAATRVEAT IIGKPEAIIA DKAVEKLGLP KSDLLMVGDN YLTDIHTGIN NGIDSLLVTT GFTKAEEVPN LPVPPTYVVS SLNDWEV
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