| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1197 |
|---|
| Symbol | glyS |
|---|
| ID | 4432672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 1108659 |
|---|
| End bp | 1110680 |
|---|
| Gene Length | 2022 bp |
|---|
| Protein Length | 673 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639666941 |
|---|
| Product | glycyl-tRNA synthetase subunit beta |
|---|
| Protein accession | YP_809151 |
|---|
| Protein GI | 116511935 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.28917 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATT ACTTACTTGA AATTGGTTTG GAAGAAATTC CAGCACATTT GGTGACTCCT
TCAATCAATC AATTGGCTGA ACGAATGGAA GCATTTCTTA ATGAAAACCG TTTAAAATTT
GATAAAATCA TTAAATTTTC AACACCACGC CGCCTAGCTC TTATTGTTGA AGGGCTGTCA
GAATCATCAG AAGCGATTGA TGAAGAAGTT AAAGGTCCTT CTGCAAAAAT TGCTAAAGAC
GCTGAAGGAA ATTGGTCAAA AGCGATTCAA GGTTTTTCAC GTGGTCAAGG AGCGACTCCG
GATGATTTAA TCCTTAAGGG TGATTATTAT TATGCTAAAA AACATGTTGA TGGTGTAAAA
GCAGAAGAAA TTCTTTCTAA AGTTGGGGAT GAAGTCATTG CAAAAATGAC CTTCTCAACT
TATATGAAAT GGGGAAATAA TGATTTCTTA TTTGTTCGTC CTATACAATG GATCGTATCA
CTTTTAGAAG ATGAAATCGT TGCTTTTGAT TTATTAGATG TGACCGCCAA TCGTTTTTCA
CGTGGTCATC GTTTCTTGGC AAATGTTGAG ATTGAACTCA AAAATGCCAA TGATTATGCT
AGCAAAATGC CAGAAAATTT TGTTTTAGTT GATGCTGAAC ATCGTAAAGC AGAAATATCT
GCACAAATTT TGGCTCTTGC ATCTGAAAAT AATTGGCAAG TTACTCTTCA TAAAGATTTA
TTAGAAGAAG TAAATAATAT TGTTGAATAT CCAACAGCCT TTGTAGGCTC ATTTGATCCA
AAATATTTGT CTGTTCCAGC AGAAGTTTTA GTGACATCAA TGCGTGATAA TCAACGTTAT
TTTGAAGTTT ATAACCAAGA AGGCCAATTG GCTCCTAACT TTATTTCGGT TCGTAATGGG
AATGCCGAAC ATATTGAAAA TGTAGTGCTT GGAAATGAAA AAGTCTTGGT TGCTCGTCTT
GAAGATGCTG AATTCTTCTG GAAAGAAGAT CAAAAACTTA AGATTGAAGA CTTAGTGGCT
AAACTTGGTA AAGTAACTTT CCATGCAAAA ATTGGTTCAA TCACTGAACA TATGGCACGA
ACAAAATTAA TTGCTGCTAA ATTAGCTGAT ATTGCTGGTT TAACAGATGA AGAAAAAGTA
GACGTGGCTC GTAGCGCTGA AATTTATAAA TTTGACCTTT TGACAGGAAT GGTTGGAGAA
TTTGATGAAT TGCAAGGCGT GATGGGTGAA AAATACGCTC TTTTAGCAGG GGAAAATGCA
AATGTTGCTG CGGCTATTCG TGAACATTAC ATGCCGACCT CAGCTGACGG CCAATTACCT
GAAACAAAAG TTGGTTCTGT TCTTGCAGCA GCAGATAAAA TTGATTCAGT CCTTTCTTTC
TTTAATGTTG GTTTGATTCC ATCTGGTTCA AATGACCCTT ATGCGCTACG TCGTGCAGTA
CAAGGATTGA TTCGAATTAT CGAAAAAATG AATTGGCATT TCGACCTATC TTTATTTATC
GACCAATTTG AGGGTCAAAA TCATGCTGAA ATTTTGGAAT TCGTCAAAGC ACGCGTTCAA
AAACTTTTGC TTGAAAAATT AGACCGTTAT GATATTGTTG AAGCAGCAAT TAATAGCTCA
AACTTTGATA TTACAAATAT GATGGAATCA GCATTTGTTA TTGATGGTCA TAAACTTCAC
GAACCATTTA AACCAGCGAT TGAAAATGTT TCACGTTCAA TTAATTTAGT TAAAAAAGCA
GCTGATATTG CTGAAATTAA TCCAGCACTT TTTGAAGAAG ATACTGAACA AGCACTTTAT
GATGCCGTTA TTTCTCTGCA AAATCAATGG ACTTATAAGC CATGTGAAGA AAAATTCCGA
GCAATTGTTC ATACGCTTGC TCCTGCAATT GAAGCTTTCT TTGATAATGT GATGGTTATG
GCCGAAGATT TAGCTGTTCG TGATAATCGG ATTGCCTTAT TGTCAGAAGT TGTTGCATTA
ACAAGTGTTA TGGCTGATTT TTCTTTGATT AATACAAAAT AA
|
|---|
| Protein sequence | MTNYLLEIGL EEIPAHLVTP SINQLAERME AFLNENRLKF DKIIKFSTPR RLALIVEGLS
ESSEAIDEEV KGPSAKIAKD AEGNWSKAIQ GFSRGQGATP DDLILKGDYY YAKKHVDGVK
AEEILSKVGD EVIAKMTFST YMKWGNNDFL FVRPIQWIVS LLEDEIVAFD LLDVTANRFS
RGHRFLANVE IELKNANDYA SKMPENFVLV DAEHRKAEIS AQILALASEN NWQVTLHKDL
LEEVNNIVEY PTAFVGSFDP KYLSVPAEVL VTSMRDNQRY FEVYNQEGQL APNFISVRNG
NAEHIENVVL GNEKVLVARL EDAEFFWKED QKLKIEDLVA KLGKVTFHAK IGSITEHMAR
TKLIAAKLAD IAGLTDEEKV DVARSAEIYK FDLLTGMVGE FDELQGVMGE KYALLAGENA
NVAAAIREHY MPTSADGQLP ETKVGSVLAA ADKIDSVLSF FNVGLIPSGS NDPYALRRAV
QGLIRIIEKM NWHFDLSLFI DQFEGQNHAE ILEFVKARVQ KLLLEKLDRY DIVEAAINSS
NFDITNMMES AFVIDGHKLH EPFKPAIENV SRSINLVKKA ADIAEINPAL FEEDTEQALY
DAVISLQNQW TYKPCEEKFR AIVHTLAPAI EAFFDNVMVM AEDLAVRDNR IALLSEVVAL
TSVMADFSLI NTK
|
|---|
| |