Gene LACR_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1162 
Symbol 
ID4433919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp1080025 
End bp1080864 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content40% 
IMG OID639666908 
Producttransposase 
Protein accessionYP_809118 
Protein GI116511902 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000280692 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGACGCT TTATCAAAAC GAGGGTTCCC CTTGAGGTTC AAAACCGAAA GAACGTCCAT 
CTCGCAACAT CAGATTGCTT AGTTATCGCT TGTTACCTCT GGGGCGTACT GCATTTTAGT
GAAACGCTTA AAGCTAAGCA CCAACTTGCT CAAAGTTTAT TTCCTAATTT CCTAGAATAT
TCTCGCTTTG TCCGTCGTTG TAATGCCCTC TTACCGAGTA TCCAAGTCAT TCGCCAAGCA
CTCGTCTTTA AAGAGGTTGA AGGAATTAGT GTATCCATTA TTGACAGCTT CCCCATTCCT
TTGTGTCAGC CTATTCGTAA TTTCAGAAGC AAAGGTCTTG GAGATTATGC AAATGTTGGC
TACAATGCTA CAAAGGGACA GTACTTCTAT GGATGTAAAT GTCATGCTTT AGTCAGTGAA
TCAGGCTATG TCATAGACTA CACAATTACT CCTGCTTCAA TGGCTGATAG TTCAATGACC
GAGGAAGTGT TGAGTCAATT TGGGACACCA ACAGTCCTTG GAGATATGGG ATATTTAGGT
CAGTCACTGC ATGATAGGCT GGAATTAAAA GGAATTGAGC TAATGACACC TGTCAGGAAG
AACATGAAGC AAAAGAAAAT CCTTTTCCCT AATTTTTCAA AACGTAGAAA AGTGATTGAG
CGAGTTTTCT CTTTTTTGAC AAATCTAGGA GCTGAGCGTT GTAAAAGTCG TTCGCCTCAA
GGTTTTCAAT TGAAATTAGA GATGATACTT TTAGCGTATT CTTTACTGTT AAAATCAGCT
AAATCACTGG AACCAGAGAC TTTAAGATAT TCTATCGGGT ATCAAGTCAT GGCTAAATAA
 
Protein sequence
MRRFIKTRVP LEVQNRKNVH LATSDCLVIA CYLWGVLHFS ETLKAKHQLA QSLFPNFLEY 
SRFVRRCNAL LPSIQVIRQA LVFKEVEGIS VSIIDSFPIP LCQPIRNFRS KGLGDYANVG
YNATKGQYFY GCKCHALVSE SGYVIDYTIT PASMADSSMT EEVLSQFGTP TVLGDMGYLG
QSLHDRLELK GIELMTPVRK NMKQKKILFP NFSKRRKVIE RVFSFLTNLG AERCKSRSPQ
GFQLKLEMIL LAYSLLLKSA KSLEPETLRY SIGYQVMAK