| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0959 |
|---|
| Symbol | |
|---|
| ID | 4433000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 900796 |
|---|
| End bp | 902667 |
|---|
| Gene Length | 1872 bp |
|---|
| Protein Length | 623 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639666717 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_808928 |
|---|
| Protein GI | 116511712 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1511] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR03057] X-X-X-Leu-X-X-Gly heptad repeats
[TIGR03062] YhgE/Pip C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00543894 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAG CTTCTGACGG ATCAAATAAA TTAGCTGATG GGACTTCGTC AGCGCTGTCA
GGTTCCAAAG AATTGACTAA TAATTTGAAC ACTTTGTCCT CTTCTAGTGT AACTTTTAAT
GATGGCGCTG ATAGTTTGAA TTTTGGCCTA AATAAGTTTG TTTTAGGAGT GGATCAAGCT
GCAAATGGAG GACAACAAGT CTCTTCAGGT GCTGCCCAAT TTGTCAGTGG AACTCAACAA
TTAGCTGAGG GAACCCAAAC TTTGGCTGAT AAATCTAAAG ATCTGTCAGC AGGAATTTCA
CAGATTTCTC AAAGTACAGA AGCGGTGAGT CAACTGCAAT CGGGTGTGCA ACAACTATCC
GAAGGCTTAA GTCAAATGGC TCAAAAAACA ACTTTATCCG AAACTCAACA GCAAAATATT
AGTGCTGTGC AAAATGGTCT TACTGAATTA AATCAAGAGT TACAAAATAA TACGATTGAC
CCAAATTTGG CTGCTAATGT CCAAAAAAAC TTGGAAGGTC TTGGAGCTAC GGTTACAAAT
TTAGCTAATG ATCAAGTGGC AGCCACTAAG GCAGCAGTTG AAAGTACTGA GACTTTTAAA
ACTTTAACCG AAAGTCAGAA AACAGATATA AGAAATGCAT TAGATAATTC TGTTGGTGCC
GGAGCGGTTC AAGCTGATTT ACTATCATTA AATGAGAATA TTACAGGGGT CAAAAATAGT
CTTACAAGTC TACTACCAAT GTTTGGAAAA ATTGCTGATC TTAAAACATT AGTTCCAGGG
GCAAGTCAAA CAATCACTGA CCTTTCTACA GGTTTAAATA GTGTGAATAG TAGCTTGAAT
AGTCAAATTT TACCAGGAAT GAATAAACTA GACACTGGTT TGACAACATT CAATAGTCAA
CTCACCTCTG GTGGACAAAA ATTGAGTTCT GGCTTTACCC AATATGCTGA CGGAGTAGCT
AAGGCAAACG CTGGTGCTCA ACAATTGGCA AGTAAATCAA AAGACTTGCA AAGTGGAACC
ATGCAATTAG TTTCAGGATT GACTCAACTA CAAGCGAATG GTCCATCATT AACTTCTGGC
TCAAACCAAT TGGCAAGTGG TGCAAAGCAA ATTTCAACGG GTTCACAACA GTTGGCAAAT
GGTGGCTCAA GCTTAACTAA TGGTTTGGGA ACTTTAAATA CAGGTGCTAC TGATTTATCA
ACAGCTTTAA CTAAGGCTGA TGATAGTCTG TCAGCAACAA ATTCTACTGA CGAAAATGCT
AAAAAAGTAG CAGCTCCACT GAAACTTAAA CATACTGACC ATGATAATGT GCCAGTAAAT
GGTGCTGGGA TGACTCCTTA TATGATTAAT GTTGCACTCT TTATTGGGGC GCTTGCCACT
AATGTCGTAA TTGGAGTTGG TTTCTCAGGA GAAAAATGGA AATCAGGACG CGAATTTATG
TTTGCTAAGA TTGGCACAAA TGGTTTGGTT GCACTTTTGC AAGGAATCAT TGTCTGGGGA
GCAGTGGCAC TTCTTGGTTT GAGTCCAAAT CATTGGTGGG AAATGCTATT AGTCGTTCTT
TTGATAAGTT TTGCTTACAT GGCTATAAAT ACTTTCTTCT TAACGGCTTT AGGAAAAGTA
GGTGAGTTTG TCATGATTGT CGTTCTTGTG TTACAATTAG CGACAAGCGC TGGAACTTAT
CCATTACAAT TAGCTCCTAA GATCTATCAA GTCATCAGTC CATGGTTGCC AATGACCTAT
GGATTAAAGA TGCTACGTGA AACAATTGGC TTGAATGGCG CGATTTTACC TGAAGCAATT
CTCTTTGTGG TTATTATCGC CGTCTTTACA TTCATGTTGA GTTTCTTCAA AAAATTCTCA
CGCTTTGCTT AA
|
|---|
| Protein sequence | MKEASDGSNK LADGTSSALS GSKELTNNLN TLSSSSVTFN DGADSLNFGL NKFVLGVDQA
ANGGQQVSSG AAQFVSGTQQ LAEGTQTLAD KSKDLSAGIS QISQSTEAVS QLQSGVQQLS
EGLSQMAQKT TLSETQQQNI SAVQNGLTEL NQELQNNTID PNLAANVQKN LEGLGATVTN
LANDQVAATK AAVESTETFK TLTESQKTDI RNALDNSVGA GAVQADLLSL NENITGVKNS
LTSLLPMFGK IADLKTLVPG ASQTITDLST GLNSVNSSLN SQILPGMNKL DTGLTTFNSQ
LTSGGQKLSS GFTQYADGVA KANAGAQQLA SKSKDLQSGT MQLVSGLTQL QANGPSLTSG
SNQLASGAKQ ISTGSQQLAN GGSSLTNGLG TLNTGATDLS TALTKADDSL SATNSTDENA
KKVAAPLKLK HTDHDNVPVN GAGMTPYMIN VALFIGALAT NVVIGVGFSG EKWKSGREFM
FAKIGTNGLV ALLQGIIVWG AVALLGLSPN HWWEMLLVVL LISFAYMAIN TFFLTALGKV
GEFVMIVVLV LQLATSAGTY PLQLAPKIYQ VISPWLPMTY GLKMLRETIG LNGAILPEAI
LFVVIIAVFT FMLSFFKKFS RFA
|
|---|
| |