Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0886 |
Symbol | |
ID | 4433319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 826230 |
End bp | 828236 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639666646 |
Product | NADH dehydrogenase |
Protein accession | YP_808857 |
Protein GI | 116511641 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00969206 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTAAGA AACAAATCGT AGTCATCGGT GGTGGTGTTG CAGGAGTACA TGCGACGCGT GAGCTTTCTA AAAAGCTTAA AGCAGATGCT GACATCACAT TGATTGACAA ACATAGTTAC CACACAACCA TGACTCAACT CCACGAAGTT GCAGCTGGTC GTGTTCCATT CACAACTGTA CAATATGATT TCCAAAAGCT TTTAGGAAAA CGTAAAAATG TTAGTCTTGT GACCGATTCA GTAGTCAGCC TTGACAAAGA AAATAAAAAA GTAATTACAA AACATGGTAG TTACAACTAT GACTATGTTA TTGTTGCGCT TGGTGGAGAA CCAAATGATT TTGGCGTTCC AGGTGTAAAA GAACATGGAT TTACTCTTTG GTCACTTGAA GACGCAATGA AAATTAAACG TCACTTGGAA ACAATTGTTC AATATGCTTC CACAGAAGTT GACGATGAAA AACGCCGTGC TTTATTGACG ATTTCAGTTG CTGGTTCAGG ATTTACTGGT ATTGAAATGG CCGGTGAATT GATTGACTGG CGTAAAAAAG TTTCAACAGA TTGGAAGATT CCTGAAGAAG AAATTACAAT CAATGTTGTT GAAATGATGC CAACAATTCT TAATACATTA GACCGTAAAC AAGCAGATAA AGCTCATGCT TATCTTGAAA AGAAAAATGT TCACGTTTTG ACTAATCATG GAATTGTTGA AGTGGCCAAA GACCATATCA AAGTAAATGT TGGTGGACGT GACGAAGAAA AAGTTGCCAA AGAACTTCCA ACACATACAT TGATTTGGAC AACAGGTGTT CAAGGAAATA CAGCTGCAAA AACAGATCTC AACGAAACAG AGCGTGGCCA TCGTCTTCAA GCAAATGAAT ACATGGAAGC TGTTGGTTTT GAAGGAAAAG GAATCTATGT AGCTGGTGAC GTTTCAGGCT ATATCGAACC AGATACTGGT CGTCCAACAC CACAAATCGT TGAAGCCGCA GAACAAACTG CACACACAGC AGCAGCAAAT ATTCTTGCAG ACATCAACGT TGGAAGCAAA CATAAACACG AAAGTAAATA CCAAGGAACA ATGGTTTCAA TCGGTTCAAC TTGGGGAGTT GCTAAAATTG GTAGCATGCG TCTAACTGGT TTCTGGGCAA TGTTGATGAA GAATATTGTT TACTTTATCT ATACATTACA AATTCGCTCA GCACATTATT TCTGGCGTTA TGCCTTGGAT GAAGTCTTCC GCGTAAAAGA TAATCGTAAC TTTATGCGTG GTCATACTTC ACGTCAAGGA AATGTACTTT GGTCTGTTCC GCTTCGTATT TTCTACGGTG TCGTTTGGTT TACCGAAGCA ATCAAGAAAA TTGTGGGTGA CGGTCAATAC TTCAATCCAA CGACTTGGTT TGGTAAAGGT TCATGGTTTA CAAATGACCT CAAATTCCCA TTCTCATGGT TACAAGAAGT ACCAAAAGCA GCAGATGCTG CAGCTGGAGC TTCAACAGCC GCTTCATCAA GCTCTAGTGT TGCAGATGCC GCCGCAGCAG GTGCCTCAGG TGCAGCAACA ACAGCCGCTT CAAGTGGTGG TGGAGAAGCC GCACACAAAG CAACTGAATG GGGACTTTCA TATGCTTATG GCTCTGACCC AATGACTGTA TTTGATAAAG TGCCACATTG GATGGAACCA ATCTTTAAGT TCATGATTCC AAACCGTGAA GTTGCCTTGT TCATGCAAAA ATTCATGTCT ATCGTTGAAA TCTTCCTTGC ACTTGCACTC ATTTTTGGAC TTTTCACTTG GATTGCAGCA GCAGCAACAG CCGCTTTGAC TGTTATGTTC TCACTTTCAG GAATGTTCTA CTGGGTTAAC ATTTGGTTTA TTCCAGTGGC AATTGCCCTC ATGAATGGTT CTGGTCGTTC ATTTGGTTTA GATAAATGGG TTCAACCTTG GATTCAAAGA TGGCTAACCA AGATATGGTA TGGTCAATCA CGTTCAATTT ATAAAGGACG TCAATAG
|
Protein sequence | MTKKQIVVIG GGVAGVHATR ELSKKLKADA DITLIDKHSY HTTMTQLHEV AAGRVPFTTV QYDFQKLLGK RKNVSLVTDS VVSLDKENKK VITKHGSYNY DYVIVALGGE PNDFGVPGVK EHGFTLWSLE DAMKIKRHLE TIVQYASTEV DDEKRRALLT ISVAGSGFTG IEMAGELIDW RKKVSTDWKI PEEEITINVV EMMPTILNTL DRKQADKAHA YLEKKNVHVL TNHGIVEVAK DHIKVNVGGR DEEKVAKELP THTLIWTTGV QGNTAAKTDL NETERGHRLQ ANEYMEAVGF EGKGIYVAGD VSGYIEPDTG RPTPQIVEAA EQTAHTAAAN ILADINVGSK HKHESKYQGT MVSIGSTWGV AKIGSMRLTG FWAMLMKNIV YFIYTLQIRS AHYFWRYALD EVFRVKDNRN FMRGHTSRQG NVLWSVPLRI FYGVVWFTEA IKKIVGDGQY FNPTTWFGKG SWFTNDLKFP FSWLQEVPKA ADAAAGASTA ASSSSSVADA AAAGASGAAT TAASSGGGEA AHKATEWGLS YAYGSDPMTV FDKVPHWMEP IFKFMIPNRE VALFMQKFMS IVEIFLALAL IFGLFTWIAA AATAALTVMF SLSGMFYWVN IWFIPVAIAL MNGSGRSFGL DKWVQPWIQR WLTKIWYGQS RSIYKGRQ
|
| |