Gene LACR_0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0886 
Symbol 
ID4433319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp826230 
End bp828236 
Gene Length2007 bp 
Protein Length668 aa 
Translation table11 
GC content40% 
IMG OID639666646 
ProductNADH dehydrogenase 
Protein accessionYP_808857 
Protein GI116511641 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00969206 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAGA AACAAATCGT AGTCATCGGT GGTGGTGTTG CAGGAGTACA TGCGACGCGT 
GAGCTTTCTA AAAAGCTTAA AGCAGATGCT GACATCACAT TGATTGACAA ACATAGTTAC
CACACAACCA TGACTCAACT CCACGAAGTT GCAGCTGGTC GTGTTCCATT CACAACTGTA
CAATATGATT TCCAAAAGCT TTTAGGAAAA CGTAAAAATG TTAGTCTTGT GACCGATTCA
GTAGTCAGCC TTGACAAAGA AAATAAAAAA GTAATTACAA AACATGGTAG TTACAACTAT
GACTATGTTA TTGTTGCGCT TGGTGGAGAA CCAAATGATT TTGGCGTTCC AGGTGTAAAA
GAACATGGAT TTACTCTTTG GTCACTTGAA GACGCAATGA AAATTAAACG TCACTTGGAA
ACAATTGTTC AATATGCTTC CACAGAAGTT GACGATGAAA AACGCCGTGC TTTATTGACG
ATTTCAGTTG CTGGTTCAGG ATTTACTGGT ATTGAAATGG CCGGTGAATT GATTGACTGG
CGTAAAAAAG TTTCAACAGA TTGGAAGATT CCTGAAGAAG AAATTACAAT CAATGTTGTT
GAAATGATGC CAACAATTCT TAATACATTA GACCGTAAAC AAGCAGATAA AGCTCATGCT
TATCTTGAAA AGAAAAATGT TCACGTTTTG ACTAATCATG GAATTGTTGA AGTGGCCAAA
GACCATATCA AAGTAAATGT TGGTGGACGT GACGAAGAAA AAGTTGCCAA AGAACTTCCA
ACACATACAT TGATTTGGAC AACAGGTGTT CAAGGAAATA CAGCTGCAAA AACAGATCTC
AACGAAACAG AGCGTGGCCA TCGTCTTCAA GCAAATGAAT ACATGGAAGC TGTTGGTTTT
GAAGGAAAAG GAATCTATGT AGCTGGTGAC GTTTCAGGCT ATATCGAACC AGATACTGGT
CGTCCAACAC CACAAATCGT TGAAGCCGCA GAACAAACTG CACACACAGC AGCAGCAAAT
ATTCTTGCAG ACATCAACGT TGGAAGCAAA CATAAACACG AAAGTAAATA CCAAGGAACA
ATGGTTTCAA TCGGTTCAAC TTGGGGAGTT GCTAAAATTG GTAGCATGCG TCTAACTGGT
TTCTGGGCAA TGTTGATGAA GAATATTGTT TACTTTATCT ATACATTACA AATTCGCTCA
GCACATTATT TCTGGCGTTA TGCCTTGGAT GAAGTCTTCC GCGTAAAAGA TAATCGTAAC
TTTATGCGTG GTCATACTTC ACGTCAAGGA AATGTACTTT GGTCTGTTCC GCTTCGTATT
TTCTACGGTG TCGTTTGGTT TACCGAAGCA ATCAAGAAAA TTGTGGGTGA CGGTCAATAC
TTCAATCCAA CGACTTGGTT TGGTAAAGGT TCATGGTTTA CAAATGACCT CAAATTCCCA
TTCTCATGGT TACAAGAAGT ACCAAAAGCA GCAGATGCTG CAGCTGGAGC TTCAACAGCC
GCTTCATCAA GCTCTAGTGT TGCAGATGCC GCCGCAGCAG GTGCCTCAGG TGCAGCAACA
ACAGCCGCTT CAAGTGGTGG TGGAGAAGCC GCACACAAAG CAACTGAATG GGGACTTTCA
TATGCTTATG GCTCTGACCC AATGACTGTA TTTGATAAAG TGCCACATTG GATGGAACCA
ATCTTTAAGT TCATGATTCC AAACCGTGAA GTTGCCTTGT TCATGCAAAA ATTCATGTCT
ATCGTTGAAA TCTTCCTTGC ACTTGCACTC ATTTTTGGAC TTTTCACTTG GATTGCAGCA
GCAGCAACAG CCGCTTTGAC TGTTATGTTC TCACTTTCAG GAATGTTCTA CTGGGTTAAC
ATTTGGTTTA TTCCAGTGGC AATTGCCCTC ATGAATGGTT CTGGTCGTTC ATTTGGTTTA
GATAAATGGG TTCAACCTTG GATTCAAAGA TGGCTAACCA AGATATGGTA TGGTCAATCA
CGTTCAATTT ATAAAGGACG TCAATAG
 
Protein sequence
MTKKQIVVIG GGVAGVHATR ELSKKLKADA DITLIDKHSY HTTMTQLHEV AAGRVPFTTV 
QYDFQKLLGK RKNVSLVTDS VVSLDKENKK VITKHGSYNY DYVIVALGGE PNDFGVPGVK
EHGFTLWSLE DAMKIKRHLE TIVQYASTEV DDEKRRALLT ISVAGSGFTG IEMAGELIDW
RKKVSTDWKI PEEEITINVV EMMPTILNTL DRKQADKAHA YLEKKNVHVL TNHGIVEVAK
DHIKVNVGGR DEEKVAKELP THTLIWTTGV QGNTAAKTDL NETERGHRLQ ANEYMEAVGF
EGKGIYVAGD VSGYIEPDTG RPTPQIVEAA EQTAHTAAAN ILADINVGSK HKHESKYQGT
MVSIGSTWGV AKIGSMRLTG FWAMLMKNIV YFIYTLQIRS AHYFWRYALD EVFRVKDNRN
FMRGHTSRQG NVLWSVPLRI FYGVVWFTEA IKKIVGDGQY FNPTTWFGKG SWFTNDLKFP
FSWLQEVPKA ADAAAGASTA ASSSSSVADA AAAGASGAAT TAASSGGGEA AHKATEWGLS
YAYGSDPMTV FDKVPHWMEP IFKFMIPNRE VALFMQKFMS IVEIFLALAL IFGLFTWIAA
AATAALTVMF SLSGMFYWVN IWFIPVAIAL MNGSGRSFGL DKWVQPWIQR WLTKIWYGQS
RSIYKGRQ