Gene LACR_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0870 
Symbol 
ID4433138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp808863 
End bp809708 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content35% 
IMG OID639666632 
ProductHAD superfamily hydrolase 
Protein accessionYP_808843 
Protein GI116511627 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000525914 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACCTCA GTGACTCGGT GTGGTATAAT AAAGCAATGG ATAAAGAAAT TAAACTGATT 
GCCCTCGATT TGGACGGGAC TTTACTTAAC TCTTCAAAAG AAATCTCAAA AGAAAATAGA
CTGGCCATTG ATGCGGCACG TCAAAAAGGG GTCCACGTTG TGTTGACAAC TGGCCGCCCT
CTGATTGCGA TTCAGCCTTT TCTTAAGACC TTAGAAATGC TTGATTTTGA AGACTTTTCT
ATTACATTTA ATGGTGGTCT GGTTCAAAGA AATACAGGAC AAATCTTATC TAAAAAAAGT
TTTACTCATG ATGAAATACT TGAAATTAAA GAATTAACTA CAAAACTAGG AATTCCATGT
GATGTTTTGA GTGAAGAAAA GGTTTATATG ACCAAAAGTG ACGTTGTTTC TCAATATGAT
ACGTTGAATA AACTCCTGAC TTTCATTAAA GTTGATTTTG ACCAAGTTAC ACTAGATGTT
GTTTACAATA AAATCGTTTC TTGTACTGAT AAAGAGTTGC TAGATGCTCA ATTAAGCAAA
ATTCCAGAAT CTTATTTTGA AGAATTTGAG ATTTTTAAAA CACAGGCTAA ACTTTTAGAA
TTTATGCCTA AAGGGATTAA TAAAGCTTAT GGTTTGACAC AATTGACAAA TCAGTTGAAT
TTAGGGGCAG AAAATGTAAT GGCTATGGGC GATGAAGCCA ATGATTTATC GATGATATCA
TGGGCGGGTT ATGGAGTCGC AATGGCAAAT GCTGTGCCCG CTGTTAAAGA AGAAGCTAGA
ATAATTTCTG ATTTAACAAA TGACCAACAT GCCGTGGCCC ATATGATTGA AAGATATGTA
CTTTAA
 
Protein sequence
MNLSDSVWYN KAMDKEIKLI ALDLDGTLLN SSKEISKENR LAIDAARQKG VHVVLTTGRP 
LIAIQPFLKT LEMLDFEDFS ITFNGGLVQR NTGQILSKKS FTHDEILEIK ELTTKLGIPC
DVLSEEKVYM TKSDVVSQYD TLNKLLTFIK VDFDQVTLDV VYNKIVSCTD KELLDAQLSK
IPESYFEEFE IFKTQAKLLE FMPKGINKAY GLTQLTNQLN LGAENVMAMG DEANDLSMIS
WAGYGVAMAN AVPAVKEEAR IISDLTNDQH AVAHMIERYV L