Gene LACR_0862 details

Gene Information

• Locus tag: LACR_0862
• Symbol: rnc
• ID: 4433130
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactococcus lactis subsp. cremoris SK11
• Kingdom: Bacteria
• Replicon accession: NC_008527
• Strand: +
• Start bp: 798050
• End bp: 798745
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 639666624
• Product: ribonuclease III
• Protein accession: YP_808835
• Protein GI: 116511619
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCAAGC TTCAAGAAAA ATTAAAAAAT GATTATGGAT TAGTCTTCAA TGATGAAGAC 
TTGTTAAAAA CAGCTTTTAC ACATTCTTCA TTTACGAATG AAGAACGGCT CCCAAAGATT 
GCAAACAATG AACGTTTGGA ATTTTTGGGA GACGTCGCCT TATCTTTGGT GATTTCAGAT 
TACCTTTACC GAACTTATCC GGAAAAACTT GAGGGGGAGC TTTCGAAAAT GCGTTCAAGT 
ATTGTTCGGA CAGAGTCGTT GGCTAACTTT TCACGTTCTT GTGGATTTGG GGAGTTCTTA 
CGATTAGGTC ATGGGGAAGA AAAAATGGGT GGCCGTGACC GAGAGACAAC ACTAGAAAAC 
CTTTTTGAAG CGTTTTTGGG TGCCCTTTTT ATTGACCAAG GGATGGATGA AGTTCGTAAG 
TTTATTCAAC ATGTCGTGAT TCCCCATGTT AAAAATGATG ATTATGTTAA AGTGATTGAC 
TATAAAACAG AATTACAAGA AGTTCTACAA GTCGGTGGTG AAACCACAAT TACCTATAAC 
ATCTTGAAAG AAGAAGGACC TGCCCATGAT CGCTCATTTG TTGCGGCGGT TTATAACAAT 
GGCAAAGAAT TGGGTCGTGG TCTAGGAAAA TCCAAAAAAG TGGCAGAACA AAAAGCTGCA 
GAAAATGCAA TAAAAGGGCA AAACCATGTA TCTTAA 

 

Protein sequence

MLKLQEKLKN DYGLVFNDED LLKTAFTHSS FTNEERLPKI ANNERLEFLG DVALSLVISD 
YLYRTYPEKL EGELSKMRSS IVRTESLANF SRSCGFGEFL RLGHGEEKMG GRDRETTLEN 
LFEAFLGALF IDQGMDEVRK FIQHVVIPHV KNDDYVKVID YKTELQEVLQ VGGETTITYN 
ILKEEGPAHD RSFVAAVYNN GKELGRGLGK SKKVAEQKAA ENAIKGQNHV S