Gene LACR_0610 details

Gene Information

• Locus tag: LACR_0610
• Symbol: prfA
• ID: 4433729
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactococcus lactis subsp. cremoris SK11
• Kingdom: Bacteria
• Replicon accession: NC_008527
• Strand: +
• Start bp: 560416
• End bp: 561489
• Gene Length: 1074 bp
• Protein Length: 357 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 639666386
• Product: peptide chain release factor 1
• Protein accession: YP_808600
• Protein GI: 116511384
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0746132
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGATC AGTTAGAGTC AATAGTTGGA AGATATGAAG AATTGGGTGA GTTATTATCT 
GACCCAGAAG TAGTTTCGGA TACAAAGCGT TTTATGGAAT TATCACGTGA AGAAGCAGAT 
TTACGGGATA AAGTGGCGAC TTATAATGAA TACAAGAAAG TCCTTGAAAC AATTTCTGAT 
AGCGAAGAAA TGCTTGGTGA GGGTGGACTT GATGATGAAA TGAAAGAAAT GCTCAAAGAA 
GAACTTTCAT CAGCAAAATC ACAAAAAGAA GTTCTTGAAG AAGAAATCAA AATTTTACTT 
TTGCCTAAAG ATCCAAACGA TGGTAAAAAT ATTATTTTAG AAATTCGTGG AGCTGCTGGT 
GGGGATGAAG CGGCGCTTTT TGCGGGTGAT TTATTAAATA TGTATCAACA TTTTTCTGAA 
TCTCAAGGTT GGAAGTTTGA AATTATGGAA GCGAATATCA CTGGTATTGG GGGTTATAAA 
GAGGTTTCAG CTTTGATTTC GGGTCCATCT GTTTATTCAA AATTGAAATA TGAATCTGGT 
GCTCACCGAG TACAACGTGT CCCTGTAACA GAAACACAAG GGCGCGTGCA TACTTCGACA 
GCGACAGTGC TTGTGATGCC TGAAGTTGAA GAATTCGAAA TGACAATTGA GCAAAAAGAT 
TTGCGCGTGG ATATTTATCA TGCGTCTGGT GCCGGTGGTC AGAATGTCAA TAAGGTTGCC 
ACAGCCGTGC GGATGGTTCA CTTGCCAACA GGGATTAAAG TTGAGATGCA AGAAGAACGG 
ACACAGCAAA AAAATCGCGA TAAAGCCATT AAGTTGTTGA ATACGAAAGT TTTTGATTAC 
TATCAACAAA TTGAATTGGA CAAACAAAAT GCAGAGCGTA AATCAACTGT CGGAACAGGT 
GACCGTTCTG AGCGGATTAG AACTTACAAT TTCCCACAAA ATCGTGTAAC TGACCACCGA 
ATTGGTTTGA CTTTACAAAA ATTGGATAGT ATTTTATCTG GCAAAATGGA TGAAGTGATT 
GATGCTCTGA TTGTTTATGA CCAAACGAAG AAATTAGAAG AATTAAATAA ATAA 

 

Protein sequence

MFDQLESIVG RYEELGELLS DPEVVSDTKR FMELSREEAD LRDKVATYNE YKKVLETISD 
SEEMLGEGGL DDEMKEMLKE ELSSAKSQKE VLEEEIKILL LPKDPNDGKN IILEIRGAAG 
GDEAALFAGD LLNMYQHFSE SQGWKFEIME ANITGIGGYK EVSALISGPS VYSKLKYESG 
AHRVQRVPVT ETQGRVHTST ATVLVMPEVE EFEMTIEQKD LRVDIYHASG AGGQNVNKVA 
TAVRMVHLPT GIKVEMQEER TQQKNRDKAI KLLNTKVFDY YQQIELDKQN AERKSTVGTG 
DRSERIRTYN FPQNRVTDHR IGLTLQKLDS ILSGKMDEVI DALIVYDQTK KLEELNK