Gene LACR_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0580 
Symbol 
ID4433946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand+ 
Start bp536359 
End bp537372 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content40% 
IMG OID639666360 
Productglyceraldehyde 3-phosphate dehydrogenase 
Protein accessionYP_808574 
Protein GI116511358 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.179566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGTTA AAGTTGGTAT TAACGGTTTT GGTCGTATTG GACGTTTGGC ATTACGTCGA 
ATTCAAGAAG TCGAAGGAGT TGAAGTAGCG CAAATCAATG ATTTGACAGA CCCAGCAATG 
CTTGCGCATT TACTTAAATA TGATACGACT CAAGGACGTT TTAAAGGAAC AGTTGAGGTC 
AAAGAAGATG GTTTTGATGT CAACGGAAAA TTTGTGAAAG TCACTGCTGA ACGTAATCCA 
GAAGATATTC AATGGGCTGA TTCTGGGGTG GAAATTGTTC TTGAAGCGAC AGGTTTCTTT 
GCGACTAAAG AAAAAGCTGA AAAACATTTG CATCCTGGTG GAGCTAAGAA AGTTTTGATT 
ACAGCACCTG GTGGAAATGA TGTTAAAACT GTTGTCTTCA ACACAAATCA CACAATTCTT 
GATGGAAGTG AAACAGTTAT TTCTGCCGGT TCTTGTACTA CAAATAGTTT AGCACCAATG 
GCAGACGCAT TAAACAAAAA CTTTGGTGTT AAAGGTGGGA CAATGACTAC TGTCCACTCA 
TACACTGGTG ACCAAATGAC ACTTGATGGT CCACATCGTG GTGGAGATTT CCGCCGTGCG 
CGTGCTGCAG CTGAAAATAT TGTTCCAGCA TCAAGTGGAG CGGCTAAAGC AATTGGTCTT 
GTTTTGCCTG AGCTTTCTGG TTTGATGAAA GAACACGCTC AACGTGTTTC AACTCCAACA 
GGATCAATTA CTGAACTCGT TACAGTGCTT GAAAAACATG TCACTGTTGA TGAAATCAAC 
GAAGCAATGA AAGCTGTTGC TGATGAAAGC TTTGGCTATA ATGTTGATGA AATTGTGTCA 
TCTGACATTA TCGGCATGGC TTACGGTTCA CTCTTTGATG CGACATTGAC TGAAGTGACT 
GACTTAAAAG ACGGTGGACA ATTAGTTAAA ACTGCTGCTT GGTATGACAA TGAAATGAGT 
TTCACTGCTC AATTAATTCG TACCCTTGAA TATTTTGCCA AAATTGCTAA ATAA
 
Protein sequence
MVVKVGINGF GRIGRLALRR IQEVEGVEVA QINDLTDPAM LAHLLKYDTT QGRFKGTVEV 
KEDGFDVNGK FVKVTAERNP EDIQWADSGV EIVLEATGFF ATKEKAEKHL HPGGAKKVLI 
TAPGGNDVKT VVFNTNHTIL DGSETVISAG SCTTNSLAPM ADALNKNFGV KGGTMTTVHS 
YTGDQMTLDG PHRGGDFRRA RAAAENIVPA SSGAAKAIGL VLPELSGLMK EHAQRVSTPT 
GSITELVTVL EKHVTVDEIN EAMKAVADES FGYNVDEIVS SDIIGMAYGS LFDATLTEVT 
DLKDGGQLVK TAAWYDNEMS FTAQLIRTLE YFAKIAK