Gene LACR_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0539 
Symbol 
ID4433657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand- 
Start bp506891 
End bp507523 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content37% 
IMG OID639666323 
ProductZn-dependent hydrolase, including glyoxylase 
Protein accessionYP_808555 
Protein GI116511339 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0442594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATTG AAAAAATTGT TAATAAAATT GCTCAGGAAA ATACTTATGT CCTGAGCAAT 
TCTACTTCAT ACCTTATTAT TGACCCAGGA AGTGATTCAG CAGCACTTCT TGAGTATCTA 
AAACTTACTG ACAAAGCGGT CTGTGCAATT TTACTAACTC ATGCCCATTT TGATCATATC 
ATGGGATTAA ATGATTTAAA AAAATATTTC CCAAGCGCTC CAATCTATCT TCATCACTCA 
GAAAAAGAAT GGATGAAAAA TCCTGAATTA AATGCCTCAC TATTTTTTCT GGGAAAGGCA 
ATTACTGGAC CGGATGCTGA GCAATTTTAT AAAATTGGAC AGGACTATAA TTTAGATGGA 
TTTAGATTTC GAGTTTTAGA AACTCCCGGG CATTCTATCG GTGGAGTAAG TCTTCTCTTT 
GAAAGCGAAG GCGACTCCTG CCTGTTTAGT GGAGATGCTC TCTTTAAAAA CGCTATTGGG 
CGTTGGGATT TACCAACTGG GAATCAAGCA CAACTTTTAG AATCAATTCG TGACCAACTT 
TTTAGACTCG ATAATCATAT TCGTGTGCTG CCTGGTCATG GACCAGAGAC GACAATTGGC 
GCTGAAAAAC TTCATAATCC ATTTTTCCAA TAA
 
Protein sequence
MIIEKIVNKI AQENTYVLSN STSYLIIDPG SDSAALLEYL KLTDKAVCAI LLTHAHFDHI 
MGLNDLKKYF PSAPIYLHHS EKEWMKNPEL NASLFFLGKA ITGPDAEQFY KIGQDYNLDG 
FRFRVLETPG HSIGGVSLLF ESEGDSCLFS GDALFKNAIG RWDLPTGNQA QLLESIRDQL 
FRLDNHIRVL PGHGPETTIG AEKLHNPFFQ