Gene LACR_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0348 
Symbol 
ID4434180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp318623 
End bp319888 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content40% 
IMG OID639666143 
ProductUDP-N-acetylglucosamine 1-carboxyvinyltransferase 
Protein accessionYP_808377 
Protein GI116511161 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase 
TIGRFAM ID[TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000283018 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TAGTAATTAA TGGTGGGAAG CGTATCTCTG GAACAATTCC AATTTCTGGA 
GCAAAAAATT CAGTGGTTGC TTTAATTCCT GCAACCATTC TAGCTAACGA TATTGTTACT
CTGGAAGGAG TTCCAGATAT TTCTGATGTC GCAAGTTTAG TCGAAATTAT GGAAATCACG
GGAGCAAAAA TTGAGCGAAA TCTTGAAGAA GGTCGACTTG TGATTGATAC ACGTAGTGTC
GTTTCACGTC CTCTGCCTTA TGGAAAGATT AATTCTTTGC GTGCTTCTTA TTATTTTAAT
GGTGCACTTT TGGGTCGTTT TGGACAAGCG ACAGTTGGCT TGCCTGGAGG CTGTGATTTA
GGTCCTCGTC CAACCGATTT ACATGATAAA GCCTTTAAAG CTTTAGGGGC TAAGAAGATT
CAAGAAGAAG AAGCTGAGCA CTTAGAAGTG ATTGGTGATT CATTAGTTGG AACAACCATT
TATATGGACG TTGTTTCCGT TGGAGCAACC ATCAATACGA TGCTTGCTGC TAGTCGTGCA
AAAGGTGTAA CTGTAATTGA AAATGCTGCA CGTGAGCCTG AAATTATTGA TGTGGCAACC
CTTCTTAATA ACATGGGGGC AAAAGTTCGT GGTGCAGGAA CAGATATTAT CCGTATCACT
GGGATAGATG AAATGCACGG AGCTCAACAT ACGGTAATTC CTGACCGAAT TGAGGCTGGA
ACTTACCTTG CTTTAGCTGC TGCGATGGGT GATGGGGTTA TTATTGAAAA TGTCATCTAT
GAACATTTGG AATCTTTCAT TGCTAAACTT GAAGAAATGG GCGTACGTTT GACGATTCGT
GAAGACAGCA TTGAAGTTCA TAAATCTGAA AATTTAAAAT CAGTTAATAT TACCTCTGTT
CCTTACCCAG GATTTGCGAC TGATTTGCAA CAACCAATTA CGCCACTGTT GTTAAAAGCA
AAAGGTCGTG GTTCGATTGT TGATACGATT TATCAAAAAC GTGTTAACCA CGTACCCGAA
TTAGCGCGTA TGGGTGCTAA TATTTCTGTT TTGGATGATA GAATTATTTA TGACGCTCCG
AATGAGTTAA CTGGAAGCTG TGTTCAAGCA ACAGATTTAC GTGCTGGTGC GGCTCTGGTT
ACTGCTGGAA TTATTGCCAG TGGAACTACA AAAATTTCTA ATATTGAGTT TATCCTACGA
GGCTATGATC ATATCATTGA AAAATTGACT GCTGTTGGTG TAGATATTCA ATTGATTGAA
GAGTGA
 
Protein sequence
MKKIVINGGK RISGTIPISG AKNSVVALIP ATILANDIVT LEGVPDISDV ASLVEIMEIT 
GAKIERNLEE GRLVIDTRSV VSRPLPYGKI NSLRASYYFN GALLGRFGQA TVGLPGGCDL
GPRPTDLHDK AFKALGAKKI QEEEAEHLEV IGDSLVGTTI YMDVVSVGAT INTMLAASRA
KGVTVIENAA REPEIIDVAT LLNNMGAKVR GAGTDIIRIT GIDEMHGAQH TVIPDRIEAG
TYLALAAAMG DGVIIENVIY EHLESFIAKL EEMGVRLTIR EDSIEVHKSE NLKSVNITSV
PYPGFATDLQ QPITPLLLKA KGRGSIVDTI YQKRVNHVPE LARMGANISV LDDRIIYDAP
NELTGSCVQA TDLRAGAALV TAGIIASGTT KISNIEFILR GYDHIIEKLT AVGVDIQLIE
E