Gene LACR_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0330 
Symbol 
ID4434417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp298922 
End bp299947 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content41% 
IMG OID639666126 
Productputative DNA-binding/iron metalloprotein/AP endonuclease 
Protein accessionYP_808360 
Protein GI116511144 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATA ATTATATATT AGCCTTTGAA ACTTCATGTG ATGAAACTTC AGTGGCGATT 
TTAAAAAATG GAAGTGAATT ATTATGTAAT ATCATTGCCA GTCAAATCAA TAGTCATAAA
CGTTTTGGTG GGGTTGTGCC CGAAATTGCC AGCCGTCATC ATGTCGAACA AATTACCGTT
TGTATTGAAG CAGCGCTTGA AGAAGCGGAA ATTTCAGCTG ACCAACTGAC AGCCGTTGCG
GTGACAGAAG GTCCAGGACT AAACGGTGCT TTATTAGTTG GAATCATGGC CGCAAAAACT
TTTGCTTGGG CCAACCATCT GCCTTTGATT CCTGTCAATC ATATGGCAGG GCATTTGATG
GCGGCGAGTT TAGTCGATAC CATCGAATAT CCGGCCATGG CTCTTTTGGT TTCAGGTGGA
CACTCTGAAT TGGTTTACGT TGAAAAAGAA GGAAGCTATA AAAAAGTTGG CGAAACACGG
GATGATGCGG CCGGTGAAGC TTATGATAAA GTTGGTCGGG TGATGGGATT AACTTATCCT
AGTGGAAAAG TCATTGATGA ACTGGCCCAT AAAGGTCAGG ACACTTACAA TTTCCCACGA
GCTATGATGA ACACACATGA AGTAGAATTT AGCTTTTCCG GATTGAAATC AGCCTTTATC
AATCTTGTAC ATAATGAAAA TCAAAAAGGC AATGATGTGA TTGCCAATGA CTTAGAAAAT
CTGGCAGCTT CTTTTCAAGC AGCGGTTGTT GATGTACTGA TGGCTAAAAC TAAATTGGCT
ATGGAAAAAT ACCCTGTCAA AACTTTAATT ATTGGCGGTG GAGTATCAGC AAACCAAGGC
CTACGTGAGC GTCTGTCAGC AGAAATTACT GACGAAAAAT TAATCATTCC CCCTTTGCGC
CTTTGTGGGG ATAATGCCGG TATGATTGCA GCAGCAGCCT ACATTGAATG GAAAAAAGGT
CTTGAAAATG TTCAAGCAGG ATTAGACTTA AATGCTAAAC CTAGCCTTGT TTTTGAAGAT
ATGTAA
 
Protein sequence
MKDNYILAFE TSCDETSVAI LKNGSELLCN IIASQINSHK RFGGVVPEIA SRHHVEQITV 
CIEAALEEAE ISADQLTAVA VTEGPGLNGA LLVGIMAAKT FAWANHLPLI PVNHMAGHLM
AASLVDTIEY PAMALLVSGG HSELVYVEKE GSYKKVGETR DDAAGEAYDK VGRVMGLTYP
SGKVIDELAH KGQDTYNFPR AMMNTHEVEF SFSGLKSAFI NLVHNENQKG NDVIANDLEN
LAASFQAAVV DVLMAKTKLA MEKYPVKTLI IGGGVSANQG LRERLSAEIT DEKLIIPPLR
LCGDNAGMIA AAAYIEWKKG LENVQAGLDL NAKPSLVFED M