Gene LACR_0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0301 
Symbol 
ID4433238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp278489 
End bp279685 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content36% 
IMG OID639666097 
Productintegrase 
Protein accessionYP_808331 
Protein GI116511115 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAC TAAATATAAA AGAATACAAA ACAAAAAGCG GAGAAGTACG CTATATTCTC 
CGTGGCGCTT ATATAGGTAC TGATGTGCTG ACAGGTAAGC AAGTGCGAAC TGATGTAAGA
GGACGCACAA AAAAAGACGT TAAAACTAAA CTTCAACGTC TACAGAATGA TTTTATTAAA
AATGGATGCA TGAAAAAAGA AAAGCAGCTA AAGACTTTTG CTGAGGTTGC TGAATCGTGG
TTTGATATGT ATCAGCATAC AGTCAAAAGC CATTCAATAG AGATAATGCG ATCCAATCTA
AACAGATATA TCTTGCCAGC TTTTGGCAAT ACTAAAATTG ATAGACTGAC AACTTCTCAA
ATTCAGCTAC AAGTCAATCG CTGGGCTAAA AATGCAGGTC AACCACTTAA TGGAGCGATG
AGAAGAAATA AAGGGAATGC CAAAGGGTAC AAACTTCTTC TTAATGTAAC TAATAGAATA
TTTAAATATG CGATTTCTAT GGGGCTAGTA AGCTCTAACC CATGCCTAAC TGTCATTGTC
CCTAATGTTA AAATGGAAAC CACTGAACGT GAAGTAAAGC ATTTCAACAA AGAACAACTA
CAGTCTTATT TTGATTATAT GGAGAGTTTG CCAAATACTT GGGTAAATAA TGAGCTAAGA
GCCATTTGTC GTTTACTGAC TGCTTCTGGT TTGCGGATTG GCGAGGCCAC TGCCTTATCA
TGGTCTGATA TTGACTTCGA AAAGCAGACA ATTTCTGTCA GTAAAACTAC TACTGGACAT
CAAACAATAC AAGATACACC GAAAACAAAG CATAGCAAGC GAGTAGTTAT CATTGACAGC
AAAACAATAT CACACTTGCA ACGTTGGCAT TTATATCAAA AGTCATACTT TTTAAAGCTT
GGCCAACCTA ATCAATCACT TATTTTTCCT ACAAATCAAG GTAAAATACT CGACTATCAA
CGGCTTAGAA AATCACTACA GGCTACTTTT AAAGCTACTG AACTTCATGA TATTGGATTT
CATGGCTTTC GGCATTCTCA TGCATCATTA TTATTGAATG CTGGAGTATC ATATAAGGAA
ATTCAAACAA GATTAGGACA TGCAAGTATA AAAATGACTA TGGATATTTA TAGCCATCTG
GAAAAAGAAA AGGAATCTGA GGCTGTAGAA CTTTTCGCAA AATATGCTAA TTTTTAG
 
Protein sequence
MNKLNIKEYK TKSGEVRYIL RGAYIGTDVL TGKQVRTDVR GRTKKDVKTK LQRLQNDFIK 
NGCMKKEKQL KTFAEVAESW FDMYQHTVKS HSIEIMRSNL NRYILPAFGN TKIDRLTTSQ
IQLQVNRWAK NAGQPLNGAM RRNKGNAKGY KLLLNVTNRI FKYAISMGLV SSNPCLTVIV
PNVKMETTER EVKHFNKEQL QSYFDYMESL PNTWVNNELR AICRLLTASG LRIGEATALS
WSDIDFEKQT ISVSKTTTGH QTIQDTPKTK HSKRVVIIDS KTISHLQRWH LYQKSYFLKL
GQPNQSLIFP TNQGKILDYQ RLRKSLQATF KATELHDIGF HGFRHSHASL LLNAGVSYKE
IQTRLGHASI KMTMDIYSHL EKEKESEAVE LFAKYANF