Gene LACR_0244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0244 
Symbol 
ID4433794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp226179 
End bp227600 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content41% 
IMG OID639666046 
Productmajor facilitator superfamily permease 
Protein accessionYP_808284 
Protein GI116511068 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00531035 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTCCA ATGTCATGGC AGGTTTGGAA GGCTCAATTG TGGCTACTGC TCTGCCAGCA 
ATGATGGCAG AATTACACGG CATCAAGTTG ATGAGTTGGG TTGTAACTAT TTATATGCTC
CTCATGGCTG TTTCTTCTCC CATTTGGACA AAACTGGCCG AACGTTTTGG TTATAAACAA
ATGTTTGTGC TCGGCACGCT TTTATTTACC ATCGGCTCTC TCGGCGAGGG ATTGGCCGTC
AATATGTTGA TGGTCATTGT CGCCCGCGCC CTCATGGGGC TTGGTGCTGG TGTGATGATT
CAACTTCCTT TTGTCATCTA TGGAATGATG TATCAGGCTG ATGAGCGGAG ACGCGTGATT
GGAAATACTG TCGCTGCTTA TTCATTTTCA ACTATTGCAG GACCAATTGT CGGAGGTTTG
ATTGTAACCT TACTTGACTG GCGCTGGGTC TTTTTCATCA ATATTCCGAT TGGGATTTAC
ATGGCTTTTA TTGTTTGGAA AAATTTCGAT CTTAAAACTG ACCATACTAA AAAATCAATT
GATTTTGCTG GTTCTGCTTC TCTATCCATT GCCGTCATTG CCATTATGCT TCTTTTTCAA
ATGATGGGGA ATGCGGTCAT TAATCTTCCT TTGTTGATTG CTTTATTAGT CATCAGTTTG
CTCTTTTTCA CTGGATTTTA TTTTGCTGAA AAAAGAGCGG TTGACCCCAT TGTTCCGCTT
GAACTTTTCA AAAACCCTTC ATTTATCGCT AAAAATGTCA TGTTTTTCAT GCAATATGGT
TTCTTTGGTT TTTATACAAA CTATCTGCCC ACTTGGGGGC AAGGCGTCAT GGGCGCAACG
GCATTAGTCG GTGGAATGGT TTTGATTCCA TCAGCAATCA TGCTAGTTAT CGGAACGAGA
AATGTCAATC ATCTCATTCA AAAAGTCGGC GAAAAAAGAA CGATTTATAT CGGTTTTGCT
ATCATGGTTT TAGGTGCACT TTTCTTATTT AGTTTGCCTG AACATGCCTC AATTCTTATG
CTCTTTGTGG CAACAGCAAT TCTTGGCACC GCCTTTGGGA TTGTCAACAT TACCTTGCAG
GTTGCAGTTC AAGAAAGTGT CGCTAAGCAT TTGATTGGTG CAGCGACTGC CGTTAATGCT
TTACTAAGAA CAATGGGAAC AACACTTGTC TTATCTGGCT TATCAATCGC TCTCAACCGT
ACATTTACTG ACTCAACTGC ACATAATCCA AAACTTACGA CGACACTTCT TAATCAAATT
TCTGATGCTC AAGCTTTAAA AAATATTCCA ACTGCACTCG TTGCCCCTTT GCGTCACACC
TTATTTAATG GTATGCACTT GCTTGCGCTT ATCTCCGGCT TACTTCTTTT CATTGCGCTT
TTTGTCAATT GGCTCGACCC TTGGAAAAAA GGACTAGAAT AA
 
Protein sequence
MLSNVMAGLE GSIVATALPA MMAELHGIKL MSWVVTIYML LMAVSSPIWT KLAERFGYKQ 
MFVLGTLLFT IGSLGEGLAV NMLMVIVARA LMGLGAGVMI QLPFVIYGMM YQADERRRVI
GNTVAAYSFS TIAGPIVGGL IVTLLDWRWV FFINIPIGIY MAFIVWKNFD LKTDHTKKSI
DFAGSASLSI AVIAIMLLFQ MMGNAVINLP LLIALLVISL LFFTGFYFAE KRAVDPIVPL
ELFKNPSFIA KNVMFFMQYG FFGFYTNYLP TWGQGVMGAT ALVGGMVLIP SAIMLVIGTR
NVNHLIQKVG EKRTIYIGFA IMVLGALFLF SLPEHASILM LFVATAILGT AFGIVNITLQ
VAVQESVAKH LIGAATAVNA LLRTMGTTLV LSGLSIALNR TFTDSTAHNP KLTTTLLNQI
SDAQALKNIP TALVAPLRHT LFNGMHLLAL ISGLLLFIAL FVNWLDPWKK GLE