Gene LACR_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0092 
Symbol 
ID4433452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp83953 
End bp86175 
Gene Length2223 bp 
Protein Length740 aa 
Translation table11 
GC content39% 
IMG OID639665900 
Productguanosine polyphosphate pyrophosphohydrolase/synthetase 
Protein accessionYP_808141 
Protein GI116510925 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTCAG AACCAGTCTT AACCGGAGCA GAAGTTGTCA ATATCTGCTC TGAATACATG 
AATGAAACTG ACCTTTTACT CGTAGAAAAA GCACTTGCCT GTGCTTCACT TGCCCATGCC
GACCAATATC GTGCTTCTGG CGAAGCCTAT TTTGTTCATC CTACCCAAGT TGCAGGAATA
TTAGCCAAAT TAAAACTGGA TGCCGTTACC GTTTCCTGTG GTTTTTTGCA TGATGTCGTT
GAAGATACTA ATTTTACTCA GGGTGACCTG CAAGAGTTAT TTGGCGATGA AATTGCTGAA
ATAGTAGATG GTGTTACCAA GTTAGGTAAA GTTGAGTATA AGTCACACGA AGAACAATTG
GCAGAGAACC ATCGGAAGAT GCTAATGGCT ATGTCCAAGG ATATCCGTGT TATTTTGGTT
AAACTGGCCG ACCGTTTGCA TAATATGCGT ACGCTTAAAC ATCTTCGTCC AGATAAACAA
AAACGGATTT CACGTGAAAC AATGGAAATC TATGCCCCCC TTGCTCATCG TTTAGGGATT
GCCAGTATTA AGTGGGAATT AGAAGATTTA TCCTTCCGTT ATCTTGAAGA AGCGGAATTT
TATCGCATTC GTGGTCTTAT GAATGAAAAA CGGACTGCTC GCGAAGCGCT CGTTACGGAA
GTGATTGGGA AATTACAAGA ACGTGTGGAA AAAGCAGGAG TGGATGCCGA AATTTATGGA
CGTCCGAAGC ATATTTATTC TATTTATCGT AAAATGCACG ATAAGAAAAA ACGCTTTGAT
GAAATCTATG ACTTGATTGC TATTCGCTGT ATCACTGAAA CAACAAGCGA TGTTTATACA
ACTTTGGGAT ATATTCATGA CCTCTGGAAG CCAATGCCAG GACGTTTTAA AGATTATATT
GCCAATCCGA AAGCCAATGG CTATCAATCT GTCCATACGA CAGTTTATGG ACCAAAAGGG
CCAATGGAAT TCCAGATTAG AACGCGGGAA ATGCACCAAA TTGCGGAATA TGGGGTTGCC
GCTCACTGGG CTTACAAACA AGGAATTAAA TCAAAAGTTG ATGTTCATGA AATCTCAGAA
ACATTGAATT GGATTCATGA ATTAGTCGAA TTGCGCGAAG AAGCTGGCGA CTCAGCCGAA
GATTTTGTTA AAGCAGTTCA AGAAGATATC TTATCAGACA AGATTTATGT CTTTACTCCG
AATGGTGAAG TCCAAGAACT CCCTAGAGGC TCTGGTCCAA TTGACTTTGC TTATGCGATT
CACACTAAAG TTGGAGATCA TGCGACGGGT GCTAAAGTAA ATGGACGTAT GAAACCTTTA
TCTGTTCAAT TAAAAACAGG GGACCGAGTT GAAATTATTA CCAGCTCAAG CTCTTTTGGA
CCAAGTCGTG ATTGGATTAA TTTAGTTAAA ACCAATAAGG CTCGAAATAA AATTAAGCAA
TTCTTTAAAA ACCAAGACAA AGAATTGTCG GTTAATAAAG GCCGTGAAAT GTTGCAAGAA
GCTTTGGAAG AAGCTGGTTT TGTTCCAAAT CAGTATTTAG ATAAAAAACA CCTTGATGAA
GTTTTCAATA AGATTAGTTA TCGCAATGCC GAAGCTTTGT ACGCGGCAAT TGGTTTTGGT
GAACTTTCAG CGACAACGAT TGCTAATCGT TTAACTGAAA ATGAACGCCG TGAAGCTGAG
AGAGCTAAAC AAAAAGCTGA AGCTGAAGAG CTGATGAAGG GTGAAGTTAA ACGCGAATCA
AGTAAAAATA TCATGAAAAT CCGCCACGAC GGGGGTGTTA GCGTTTCTGG TATTGATAGT
CTACTTGTTC GGATTGCCAA ATGTTGTAAT CCAGTTCCGG GTGACCAGAT TGTTGGATAT
ATTACAAAAG GTCGAGGCGT TTCTGTTCAC AGGGCGGATT GTCAAAATGT GCGCAGTATG
GAAGACTTTG AACAAAGACT TGTTGAAGTT GAATGGGATG ATTCAGAGAA CTTGGTCAAA
GAATATGTTG CTAATATTGA TGTCTATGGA TTTAATCGTC CAGGATTGCT CAATGATGTG
ATGCAAGTTT TATCAAATTC GACTAAAAAT TTGATTTCGA TAAATGCTCA ACCAACAAAA
GATAAAAAAA TGGCGAATAT TCATATCGCT TTAGGGATTA AAAATTTATC AGATTTAACT
TTGATTGTTG ATAAAATCAA AATGACTCCT GATGTTTATT CGGTAAAACG GACAAATGCT
TAA
 
Protein sequence
MPSEPVLTGA EVVNICSEYM NETDLLLVEK ALACASLAHA DQYRASGEAY FVHPTQVAGI 
LAKLKLDAVT VSCGFLHDVV EDTNFTQGDL QELFGDEIAE IVDGVTKLGK VEYKSHEEQL
AENHRKMLMA MSKDIRVILV KLADRLHNMR TLKHLRPDKQ KRISRETMEI YAPLAHRLGI
ASIKWELEDL SFRYLEEAEF YRIRGLMNEK RTAREALVTE VIGKLQERVE KAGVDAEIYG
RPKHIYSIYR KMHDKKKRFD EIYDLIAIRC ITETTSDVYT TLGYIHDLWK PMPGRFKDYI
ANPKANGYQS VHTTVYGPKG PMEFQIRTRE MHQIAEYGVA AHWAYKQGIK SKVDVHEISE
TLNWIHELVE LREEAGDSAE DFVKAVQEDI LSDKIYVFTP NGEVQELPRG SGPIDFAYAI
HTKVGDHATG AKVNGRMKPL SVQLKTGDRV EIITSSSSFG PSRDWINLVK TNKARNKIKQ
FFKNQDKELS VNKGREMLQE ALEEAGFVPN QYLDKKHLDE VFNKISYRNA EALYAAIGFG
ELSATTIANR LTENERREAE RAKQKAEAEE LMKGEVKRES SKNIMKIRHD GGVSVSGIDS
LLVRIAKCCN PVPGDQIVGY ITKGRGVSVH RADCQNVRSM EDFEQRLVEV EWDDSENLVK
EYVANIDVYG FNRPGLLNDV MQVLSNSTKN LISINAQPTK DKKMANIHIA LGIKNLSDLT
LIVDKIKMTP DVYSVKRTNA