Gene LACR_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0062 
Symbol 
ID4434649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp57506 
End bp58318 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content38% 
IMG OID639665870 
ProductHAD superfamily hydrolase 
Protein accessionYP_808111 
Protein GI116510895 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAA ACTTAAAACT TTTTGCTACA GATATGGACG GAACTTTTCT GCGCAATGAC 
CATTCTTATA ATCACAAAAA ACTTGCGGAA CTAATTAAAG AAATTCAAGA TAGAAATCTT
CTTTTTGCCG CTTCTTCTGG CCGTTCTTTA CTTGGTTTAA CAGAAGTTTT TGCTGAATAT
AAAGACCAGA TGGCTTTTGT CGCCGAAAAC GGTGGCGTTG TTGCTTATAA AGGAGAAATC
CTCTTTGCCA AAAATTTGAC TGTTGCCCAA ACGCAAGAAT TGATTGATGA CTTGCAAGAA
ATGCCATTCA GTCCTAAAAG TGATTATCTG ATTTCTGGTC TCAAAGGGGC ATATTACCCC
GAAGGAATTT CTAAAGAATA CCTGACTCAT GCCAAACTTT ACTATCCTAA CTGTCAACTT
TATCACCAAT TAGATGAAAT TGATGACAAA CTTCTCAAGG TTACCACAAA CTTTCCTGAG
GACCATGTTC GGGACTGTGA GCAATGGATT ACTGACCGTC TTTCTTTTGT CAGAGCGACA
ACGACTGGTT TTACTAGTAT TGATATCGTA CCAAATGGAA TTTCTAAAGC CTCAGGTCTG
GCACATTTGT TGGCACATTT TAATTGGCTC CCTGAAAATT TAGCTGTTTT TGGTGACCAA
ATGAATGATT TGGAAATGTT TGAATACGCT GGTTCTTCTT TTGCTGTCAG CAACGCAGCC
CCTGAAATTC TTGCTCAGGC TGACAAAGTC ATTCTTTCTA ATGACGAAGA TGCTGTCCTT
GTTGAAATTG AAAATATTTT AAATGAGCAG TAA
 
Protein sequence
MTKNLKLFAT DMDGTFLRND HSYNHKKLAE LIKEIQDRNL LFAASSGRSL LGLTEVFAEY 
KDQMAFVAEN GGVVAYKGEI LFAKNLTVAQ TQELIDDLQE MPFSPKSDYL ISGLKGAYYP
EGISKEYLTH AKLYYPNCQL YHQLDEIDDK LLKVTTNFPE DHVRDCEQWI TDRLSFVRAT
TTGFTSIDIV PNGISKASGL AHLLAHFNWL PENLAVFGDQ MNDLEMFEYA GSSFAVSNAA
PEILAQADKV ILSNDEDAVL VEIENILNEQ