Gene LACR_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0052 
Symbol 
ID4434639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp48639 
End bp49640 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content41% 
IMG OID639665861 
Productlipoate-protein ligase 
Protein accessionYP_808102 
Protein GI116510886 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0095] Lipoate-protein ligase A 
TIGRFAM ID[TIGR00545] lipoyltransferase and lipoate-protein ligase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTTA TTAACTATCT AGGTCAAGAC GCTTACACCA ATATCGCGAT GGACAGCTGG 
CTTCTTTACA ACTTAAAGCC AACTGAGCCT GTTTTTGCTC TCTGGCAAAA CAAACGTGCG
GTTATTGTTG GGCGCAACCA AAATACTTTT GCCGAAGTAA ATCAGGACTA CATTGACAGT
CATGACGTCC AAGTTGTTCG TCGGGTATCT GGCGGTGGCG CTGTTTATCA TGATGAGGGT
AACATTTGTT TCACCTTTTT TGTTCCAGTT GAAAATTCTG GTTCTGTAAA CTTTAAAAAG
TTTGTTCAGC CTATGTATGA AGCACTTCAT GCTGTAGGAA TTAAAGCAGA AATCACCGGA
CGTAATGACC TTGAAGTTGA AGGCAAAAAG ATTTCAGGGA ATGCGCAACG CTATGCAGGA
GGATATCTCA TGCATCACGG AACGCTACTT TGGGATACCG ATGTTGAAGC TATGATTCGC
TCGCTTAATG TATCCGATGA AAAATTTGTC AGTAAAGCTG CCAAATCAGT CCGTGCTCGA
GTAGGAAATA TTAAAGAGTT TGCACCTGAT GAATTAAGCT TAGGTAGCTT TATTGAAGCC
TTGAAATACT ACCTCACTGA CGAAGGAAAA GACGGCGAAC TGGTCTTAAC TGATGAGCAG
CTTGATTCCA TCAAAAAAAC ACGTGATGAG CAATTTGCTA CATGGGACTG GAATTATGGT
GAATCACCTA AGTTCTCCTT CCAAAACCAC GCTAAATTTA CTGGCGGAGC CATTGATATT
CAAGTCAATG TTGAAAATGG TAAAATTACC GAAATTAATT TCCAAGGAGA TTTCTTGGGG
GTTCGCGACT GGCGGGATAT TAAAGACCAA TTTATTGGTG TCGAATTTGA ACCCGCAGCC
GTCCTACAAG TCCTTGAAGC AAATAAGGAC GGGCAATATT TCGGAACAAT TCAAAATACC
GAACTTTCTG AAATGTTCAA AGCCGACTAT CGAGTCGACT AA
 
Protein sequence
MQFINYLGQD AYTNIAMDSW LLYNLKPTEP VFALWQNKRA VIVGRNQNTF AEVNQDYIDS 
HDVQVVRRVS GGGAVYHDEG NICFTFFVPV ENSGSVNFKK FVQPMYEALH AVGIKAEITG
RNDLEVEGKK ISGNAQRYAG GYLMHHGTLL WDTDVEAMIR SLNVSDEKFV SKAAKSVRAR
VGNIKEFAPD ELSLGSFIEA LKYYLTDEGK DGELVLTDEQ LDSIKKTRDE QFATWDWNYG
ESPKFSFQNH AKFTGGAIDI QVNVENGKIT EINFQGDFLG VRDWRDIKDQ FIGVEFEPAA
VLQVLEANKD GQYFGTIQNT ELSEMFKADY RVD