Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0028 |
Symbol | |
ID | 4432876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 27919 |
End bp | 29853 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639665837 |
Product | transcriptional antiterminator |
Protein accession | YP_808079 |
Protein GI | 116510863 |
COG category | [K] Transcription |
COG ID | [COG3711] Transcriptional antiterminator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTTAA CAAGTCGTGA ACAAAAATTA ATCCATACAT TTTTGAAACG TGGAACGCTT ACGATACCAG AAATGATGGA AATAACAGGA ACAAGTCGCA GAACCCTTTA TCGCGATTTA AATAACTTAC AAAAATCTTT ACCAGAAGAG ATAAGTTTAC AAACTTCTGA GGAAGGATAT TTTATAAAAG GAGATATAAA GCAACTTTCT CAAGCTCATG AACTAGTAGA ATATACGATG ACTGAGCGCT TGTACGGCGA GATACTTTTA TTGATTGAAA ATAAAGCATC CATTTTGTCA TTAACTGATT ATTTTGGTAT TAGTCAGCCA ACGGTCACGA ATGATTTGAG ACAATTAGAA CAGACCTTAC TTGAAAATGA AATTTCATTA ATAAGGGAGC GGGGCCTAAA GATTGAGGGA TTAGAAGAGA ATATTCGGTC AGTATTTGTG GCTGCAATAT ATAATTCTGC ATCGCTTCAA GAATTGATTA GTAATCAACT TTCAGACAAT AAACTTTTAA GTATCTTGGA CTTAGATAAA TTTAAGCAAG CTTATGATGC TTTTGAATCT CTAATCTTGC CAGAAGATAT GACAGATAAA GTGAGAGTGC TGATGGAACT CTTTCTTGTA ACAACTCTAA TCCGGATAGA CGAGGGACAT TTCATCACAA GTGAGAGTCT TAGTAGTCCA AGCAAAGGAG CGCTGAACTT TGTTAATAAA TTACTGACAG CTCTGTCAGT AACAAAATTT GTTGTATCTG AAATTACTTA TCTTGCTTCT GTCTATGAAA TTTTATATTT TGGATTTGGC CGAGAATTAT TATTTATGGA AAAATTTGAT ACAGATTTCT CCTATAAAAT TCGTCAGATT ATTGATCGAG TTTCCACAAA ACTTGAGATT GAATTTGGAA AAGACGACCG ATTATATGGT TTGCTTTACG CTCATCTCAA AGAATCAGAG ATGTTACCCA TTCTTTTTCC TAAAAAAGAA AATGATTTTA TCAAAAAAAT TAAGAAAGAT AATCCAGAAA TTTATAAAGC CGTCAATGAA TCATTGAAGT TGATTTTTGA TAAAAATTTT TCAGAAATGG AAATCACTTT TGTAACCCTT CATTTTGTTT CAACCTTGGA AAGAAGTGAC CTTGTTTTAC CATTGCGTTC AGCACTCGTA AGTAATCGTG GACGGATTTC ATGTGAATTT GTCATGAGTA ATTTAAGGAA AAATTTTCCA TTCTTAAAAA AAATAGACCT CATTCAAAAT TCTGTGAAAG TTGTCAAATC CCAATATGAT GTTATTTTTA CTACTGAGAA GGAGTTTGAT TATCTTTATA TCAATCCAAT GTTAGATCAA AAAAATCTGG ATGATATTCG TCATCAATTA AGACATATTC AACAAAAATC GCGAACGCTA ACTATTGATT CAAAAGAGCA AAGAAACTTT TTAAATCTTA ATGACTTATT TACGACTGGT AATGAAATTT TAAGCACTTT TGAAATTAAG ACACTTTCAA ACCAGCCAAA TTTGAGCGAT ACTGTAAAAC AAATCGCTAA AACTGTAAAC GAAGATGATG GAGAATTAGC AGAACTAATA GAAGCAAGAT TTCGGGAGAC ACATCTGGCA ATTCCTGAAA CCAATATTGC TCTTTTTCAT GCAGTTCATT CATCGATTTC AAGTCCACTA TTCAAGATTT ATGAGCTAAG TCAGGAAATT GAGGGGATGG CAATGGACCA TCAAATGATA AAAATTAATC GTGTTTTACT ACTTTTGGCA CCTCCAGAAG TACCAGAATA TGTTTCATAT TTACTCGGAA AACTTTCAAG TTCTATTATT GAAAATAAGC TTTATACAAG AATATATGAT TCCGGTAACT ATGAAATTGT TAGTGAGTTG CTAAGGGAAA TAATCATAGA AGCTGTTAAA CAGTATGGTG ATTAG
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Protein sequence | MFLTSREQKL IHTFLKRGTL TIPEMMEITG TSRRTLYRDL NNLQKSLPEE ISLQTSEEGY FIKGDIKQLS QAHELVEYTM TERLYGEILL LIENKASILS LTDYFGISQP TVTNDLRQLE QTLLENEISL IRERGLKIEG LEENIRSVFV AAIYNSASLQ ELISNQLSDN KLLSILDLDK FKQAYDAFES LILPEDMTDK VRVLMELFLV TTLIRIDEGH FITSESLSSP SKGALNFVNK LLTALSVTKF VVSEITYLAS VYEILYFGFG RELLFMEKFD TDFSYKIRQI IDRVSTKLEI EFGKDDRLYG LLYAHLKESE MLPILFPKKE NDFIKKIKKD NPEIYKAVNE SLKLIFDKNF SEMEITFVTL HFVSTLERSD LVLPLRSALV SNRGRISCEF VMSNLRKNFP FLKKIDLIQN SVKVVKSQYD VIFTTEKEFD YLYINPMLDQ KNLDDIRHQL RHIQQKSRTL TIDSKEQRNF LNLNDLFTTG NEILSTFEIK TLSNQPNLSD TVKQIAKTVN EDDGELAELI EARFRETHLA IPETNIALFH AVHSSISSPL FKIYELSQEI EGMAMDHQMI KINRVLLLLA PPEVPEYVSY LLGKLSSSII ENKLYTRIYD SGNYEIVSEL LREIIIEAVK QYGD
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