Gene LACR_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0028 
Symbol 
ID4432876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp27919 
End bp29853 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content32% 
IMG OID639665837 
Producttranscriptional antiterminator 
Protein accessionYP_808079 
Protein GI116510863 
COG category[K] Transcription 
COG ID[COG3711] Transcriptional antiterminator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTAA CAAGTCGTGA ACAAAAATTA ATCCATACAT TTTTGAAACG TGGAACGCTT 
ACGATACCAG AAATGATGGA AATAACAGGA ACAAGTCGCA GAACCCTTTA TCGCGATTTA
AATAACTTAC AAAAATCTTT ACCAGAAGAG ATAAGTTTAC AAACTTCTGA GGAAGGATAT
TTTATAAAAG GAGATATAAA GCAACTTTCT CAAGCTCATG AACTAGTAGA ATATACGATG
ACTGAGCGCT TGTACGGCGA GATACTTTTA TTGATTGAAA ATAAAGCATC CATTTTGTCA
TTAACTGATT ATTTTGGTAT TAGTCAGCCA ACGGTCACGA ATGATTTGAG ACAATTAGAA
CAGACCTTAC TTGAAAATGA AATTTCATTA ATAAGGGAGC GGGGCCTAAA GATTGAGGGA
TTAGAAGAGA ATATTCGGTC AGTATTTGTG GCTGCAATAT ATAATTCTGC ATCGCTTCAA
GAATTGATTA GTAATCAACT TTCAGACAAT AAACTTTTAA GTATCTTGGA CTTAGATAAA
TTTAAGCAAG CTTATGATGC TTTTGAATCT CTAATCTTGC CAGAAGATAT GACAGATAAA
GTGAGAGTGC TGATGGAACT CTTTCTTGTA ACAACTCTAA TCCGGATAGA CGAGGGACAT
TTCATCACAA GTGAGAGTCT TAGTAGTCCA AGCAAAGGAG CGCTGAACTT TGTTAATAAA
TTACTGACAG CTCTGTCAGT AACAAAATTT GTTGTATCTG AAATTACTTA TCTTGCTTCT
GTCTATGAAA TTTTATATTT TGGATTTGGC CGAGAATTAT TATTTATGGA AAAATTTGAT
ACAGATTTCT CCTATAAAAT TCGTCAGATT ATTGATCGAG TTTCCACAAA ACTTGAGATT
GAATTTGGAA AAGACGACCG ATTATATGGT TTGCTTTACG CTCATCTCAA AGAATCAGAG
ATGTTACCCA TTCTTTTTCC TAAAAAAGAA AATGATTTTA TCAAAAAAAT TAAGAAAGAT
AATCCAGAAA TTTATAAAGC CGTCAATGAA TCATTGAAGT TGATTTTTGA TAAAAATTTT
TCAGAAATGG AAATCACTTT TGTAACCCTT CATTTTGTTT CAACCTTGGA AAGAAGTGAC
CTTGTTTTAC CATTGCGTTC AGCACTCGTA AGTAATCGTG GACGGATTTC ATGTGAATTT
GTCATGAGTA ATTTAAGGAA AAATTTTCCA TTCTTAAAAA AAATAGACCT CATTCAAAAT
TCTGTGAAAG TTGTCAAATC CCAATATGAT GTTATTTTTA CTACTGAGAA GGAGTTTGAT
TATCTTTATA TCAATCCAAT GTTAGATCAA AAAAATCTGG ATGATATTCG TCATCAATTA
AGACATATTC AACAAAAATC GCGAACGCTA ACTATTGATT CAAAAGAGCA AAGAAACTTT
TTAAATCTTA ATGACTTATT TACGACTGGT AATGAAATTT TAAGCACTTT TGAAATTAAG
ACACTTTCAA ACCAGCCAAA TTTGAGCGAT ACTGTAAAAC AAATCGCTAA AACTGTAAAC
GAAGATGATG GAGAATTAGC AGAACTAATA GAAGCAAGAT TTCGGGAGAC ACATCTGGCA
ATTCCTGAAA CCAATATTGC TCTTTTTCAT GCAGTTCATT CATCGATTTC AAGTCCACTA
TTCAAGATTT ATGAGCTAAG TCAGGAAATT GAGGGGATGG CAATGGACCA TCAAATGATA
AAAATTAATC GTGTTTTACT ACTTTTGGCA CCTCCAGAAG TACCAGAATA TGTTTCATAT
TTACTCGGAA AACTTTCAAG TTCTATTATT GAAAATAAGC TTTATACAAG AATATATGAT
TCCGGTAACT ATGAAATTGT TAGTGAGTTG CTAAGGGAAA TAATCATAGA AGCTGTTAAA
CAGTATGGTG ATTAG
 
Protein sequence
MFLTSREQKL IHTFLKRGTL TIPEMMEITG TSRRTLYRDL NNLQKSLPEE ISLQTSEEGY 
FIKGDIKQLS QAHELVEYTM TERLYGEILL LIENKASILS LTDYFGISQP TVTNDLRQLE
QTLLENEISL IRERGLKIEG LEENIRSVFV AAIYNSASLQ ELISNQLSDN KLLSILDLDK
FKQAYDAFES LILPEDMTDK VRVLMELFLV TTLIRIDEGH FITSESLSSP SKGALNFVNK
LLTALSVTKF VVSEITYLAS VYEILYFGFG RELLFMEKFD TDFSYKIRQI IDRVSTKLEI
EFGKDDRLYG LLYAHLKESE MLPILFPKKE NDFIKKIKKD NPEIYKAVNE SLKLIFDKNF
SEMEITFVTL HFVSTLERSD LVLPLRSALV SNRGRISCEF VMSNLRKNFP FLKKIDLIQN
SVKVVKSQYD VIFTTEKEFD YLYINPMLDQ KNLDDIRHQL RHIQQKSRTL TIDSKEQRNF
LNLNDLFTTG NEILSTFEIK TLSNQPNLSD TVKQIAKTVN EDDGELAELI EARFRETHLA
IPETNIALFH AVHSSISSPL FKIYELSQEI EGMAMDHQMI KINRVLLLLA PPEVPEYVSY
LLGKLSSSII ENKLYTRIYD SGNYEIVSEL LREIIIEAVK QYGD