Gene LACR_D39 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_D39 
Symbol 
ID4405892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008506 
Strand
Start bp45802 
End bp47208 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content38% 
IMG OID639654638 
Product6-phospho-beta-galactosidase 
Protein accessionYP_796564 
Protein GI116326644 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase 
TIGRFAM ID[TIGR01233] 6-phospho-beta-galactosidase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAA CACTTCCTAA AGATTTTATT TTTGGTGGTG CTACAGCTGC TTATCAAGCA 
GAAGGTGCAA CTCACACAGA TGGTAAGGGC CCAGTAGCAT GGGATAAGTA TCTTGCAGAC
AATTATTGGT ATACAGCAGA ACCTGCAAGT GATTTTTACC ATAAATACCC AGTTGATTTA
GAATTAGCTG AAGAATATGG TGTTAATGGT ATTCGTATTT CTATTGCCTG GTCTCGTATT
TTCCCAACGG GTTACGGTGA AGTAAATGAA AAAGGTGTTG AATTCTACCA TAAACTATTT
GCTGAATGCC ACAAGCGTCA TGTTGAACCA TTTGTGACTT TGCATCATTT TGACACACCA
GAAGCTCTTC ATTCAAATGG AGATTTCTTA AACCGCGAAA ATATAGAACA CTTTATAGAT
TATGCCGCTT TCTGTTTTGA AGAGTTTCCA GAAGTAAACT ACTGGACAAC TTTCAATGAA
ATTGGCCCAA TTGGTGATGG TCAATACTTG GTTGGTAAAT TCCCTCCAGG CATTAAATAT
GATCTTGCCA AAGTCTTCCA ATCACACCAC AACATGATGG TCTCTCATGC ACGTGCTGTA
AAATTGTATA AGGATAAAGG TTATAAAGGT GAAATTGGTG TTGTTCATGC TTTACCAACT
AAATACCCTT ATGATCCGGA AAATCCAGCA GATGTTCGTG CTGCTGAACT TGAAGACATC
ATCCATAACA AATTTATCTT GGATGCAACC TATCTTGGGC ACTATTCAGA TAAAACGATG
GAAGGTGTCA ACCATATCCT AGCTGAGAAT GGTGGAGAAC TTGATCTTCG TGATGAAGAC
TTCCAAGCTC TTGACGCAGC TAAAGATTTG AATGATTTCC TTGGTATCAA CTATTACATG
AGTGATTGGA TGCAAGCTTT TGATGGTGAG ACTGAAATCA TTCACAATGG TAAGGGTGAA
AAAGGAAGCT CTAAGTACCA AATTAAGGGT GTTGGTCGTC GAGTAGCTCC TGACTATGTT
CCGCGCACAG ACTGGGATTG GATTATTTAT CCTGAAGGCT TGTATGACCA AATCATGCGA
GTGAAAAATG ATTATCCGAA TTACAAGAAG ATTTACATCA CTGAAAACGG TCTCGGATAC
AAAGATGAGT TTGTAGATAA TACTGTTTAT GATGATGGTC GTATTGATTA CGTGAAGCAA
CACTTGGAAG TTTTATCAGA CGCGATTGCG GATGGTGCAA ATGTTAAAGG TTACTTCATT
TGGTCACTTA TGGACGTTTT CTCATGGTCA AATGGTTATG AAAAACGTTA TGGATTGTTC
TATGTAGACT TTGATACGCA AGAACGCTAT CCTAAGAAAT CAGCACATTG GTATAAGAAA
TTAGCAGAAA CTCAAGTGAT AGAGTAA
 
Protein sequence
MTKTLPKDFI FGGATAAYQA EGATHTDGKG PVAWDKYLAD NYWYTAEPAS DFYHKYPVDL 
ELAEEYGVNG IRISIAWSRI FPTGYGEVNE KGVEFYHKLF AECHKRHVEP FVTLHHFDTP
EALHSNGDFL NRENIEHFID YAAFCFEEFP EVNYWTTFNE IGPIGDGQYL VGKFPPGIKY
DLAKVFQSHH NMMVSHARAV KLYKDKGYKG EIGVVHALPT KYPYDPENPA DVRAAELEDI
IHNKFILDAT YLGHYSDKTM EGVNHILAEN GGELDLRDED FQALDAAKDL NDFLGINYYM
SDWMQAFDGE TEIIHNGKGE KGSSKYQIKG VGRRVAPDYV PRTDWDWIIY PEGLYDQIMR
VKNDYPNYKK IYITENGLGY KDEFVDNTVY DDGRIDYVKQ HLEVLSDAIA DGANVKGYFI
WSLMDVFSWS NGYEKRYGLF YVDFDTQERY PKKSAHWYKK LAETQVIE