Gene LACR_D05 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_D05 
Symbol 
ID4405897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008506 
Strand
Start bp4086 
End bp4601 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content40% 
IMG OID639654608 
Productgalactose-6-phosphate isomerase subunit LacB 
Protein accessionYP_796534 
Protein GI116326614 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01119] galactose-6-phosphate isomerase, LacB subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.305214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATCG CAATTGGATG TGACCACATT GTCACAGATG TAAAAATGGC AGTATCAGAA 
TTCTTGAAAT CAAAAGGATA TGAGGTCCTT GATTTCGGGA CATATGACCA CGTACGTACT
CACTACCCTA TCTATGGTAA AAAAGTCGGT GAAGCAGTAG TAAGTGGTCA AGCAGACTTG
GGAGTATGTA TCTGTGGTAC GGGTGTCGGC ATTAACAATG CAGTAAATAA AGTTCCAGGT
GTTCGCTCAG CGTTGGTTCG TGATATGACG TCAGCTCTAT ATGCTAAGGA AGAACTTAAT
GCGAATGTTA TCGGTTTTGG TGGAATGATT ACTGGTGGTC TTCTTATGAA TGACATCATT
GAAGCTTTCA TTGAAGCTGA GTACAAACCA ACAGAAGAAA ATAAAAAATT GATTGCAAAA
ATCGAACACG TTGAAACACA TAATGCACAT CAAGCAGATG AGGAATTCTT TACAGAATTC
CTTGAAAAAT GGGACCGTGG TGAGTACCAC GATTAA
 
Protein sequence
MRIAIGCDHI VTDVKMAVSE FLKSKGYEVL DFGTYDHVRT HYPIYGKKVG EAVVSGQADL 
GVCICGTGVG INNAVNKVPG VRSALVRDMT SALYAKEELN ANVIGFGGMI TGGLLMNDII
EAFIEAEYKP TEENKKLIAK IEHVETHNAH QADEEFFTEF LEKWDRGEYH D