| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_72490 |
|---|
| Symbol | polA |
|---|
| ID | 4385162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 6456695 |
|---|
| End bp | 6459436 |
|---|
| Gene Length | 2742 bp |
|---|
| Protein Length | 913 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639328441 |
|---|
| Product | DNA polymerase I |
|---|
| Protein accession | YP_793970 |
|---|
| Protein GI | 116053643 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
|---|
| TIGRFAM ID | [TIGR00593] DNA polymerase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.579087 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAG CGCCCCTCGT CCTGGTGGAC GGTTCCTCGT ACCTGTACCG CGCCTTCCAT
GCCCTGCCGC CGCTGACCAC TTCGACCGGC AAGCCCACCG GTGCGGTGAA GGGCGTGCTG
AACATGCTCC TGAGCCTGCG CAAGCAGTAC CCGGACAGCC CGTTCGCGGT GGTCTTCGAC
GCCAAGGGCC CGACCTTCCG CGACGAGCTG TTCGCCGAGT ACAAGGCCAA TCGGCCGTCG
ATGCCCGACG ACCTGCGGGT CCAGGTCGAG CCGCTGCATG CCAGCGTCCG CGCCCTCGGC
CTGCCGTTGC TGTGCGTGGA GGGGGTCGAG GCCGACGACG TGATCGGCAC CCTGGCGCGC
AGCAGCGCCG CGGCCGGCCG CCCGGTAGTG ATTTCCACCG GCGACAAGGA CATGGCGCAA
CTGGTCGACG GGCACATTAC GCTGGTCAAC ACCATGACCG GTAGCCGCCT CGACGTGGAT
GGCGTGAAAG AGAAATTCGG CGTCGGTCCT GAGCTGATCA TCGATTTCCT CGCCCTGATG
GGCGACAAGG TCGACAACAT CCCCGGCGTT CCGGGTGTCG GCGAGAAAAC CGCGCTGGGC
CTGCTGACCG GTGTCGGTGG CGGCCTGGAG GTGCTCTACG CCAGCCTGGA CAAGGTGCCC
GAGCTACCGA TCCGCGGCGC CAAGGGCTTG CCGGCGAAGC TCGAGGAAAA TCGCGAGCAG
GCGTTCCTGT CCTATCAACT GGCGACCATC AAGACCGACG TCGAACTGGA CGTGGAGATC
GACAAGCTGT ATCCCGGCGA GCCGCAGCGC GAAGCGCTGA TCGCCCTGTA CCGCGAGCTG
GAGTTCAAGA ACTGGCTGGA CGACCTCCTG CGCGAGGCCA AGGAGGCCGG CGAGAACGGC
GAGGCGGAAA CGCCTATCCA GGCCGAGGTC GACTACGACG TGGTGCTCGA CCAGGCCGGG
TTCGACGCCT GGCTGAAGAA GCTGGAGGAG GCCGAGCTGA TCGCCTTCGA TACCGAGACC
ACCAGCATCG ACGCCCAGCA GGCGCAGGTG GTGGGGGTGT CCTTCGCCGT GAAGGAGGGC
GAGGCCGCCT ACGTGCCGCT GGCCCACAGC TATATGGGCG TTCCCGAGCA ACTGGACCGT
GACGCGGTGC TGCGTGCATT GAAACCGCTG CTGGAGGATC CGAAGAAGCT CAAGGTCGGC
CAGCATGCCA AGTACGACAT CAATGTCCTG GCCAATGCCA GCACCCCCAT CGCGCTGCGG
GGCGTAGCCT ACGACACCAT GCTCGAGTCC TATGTGCTGG ACTCCACCGC CACTCGCCAC
GACATGGACA GCCTGGCCCT GAAGTACCTC GGCCACAGCA CCATCCGTTT CGAGGACATC
GCCGGCAAGG GCGCCAAGCA ACTGACCTTC GACCAGATCG CCATCGAACA GGCCGGGCCC
TATGCGGCGG AGGACGCCGA CGTGACCCTG CGCCTGCACC AGGCCCTGTG GCAGAAGCTG
GAGGCGATCC CGTCCCTGGC CAGGGTCCTG ACCGACATCG AGATGCCGCT GGTACCGGTG
CTGGCGCGGA TCGAGCGCAA CGGCGCGCTG GTCGACGCCA ACCTGCTGGG CATCCAGAGC
CGCGAACTGG GCGAGAAGAT GGTCGCCCTG GAGCGCCAGG CATACGACCT GGCGGGGCAG
GAATTCAACC TCGGCTCGCC CAAGCAGCTC GGCGCGATCC TCTACGACAA GCTCGGCCTG
CCGGTGCTGA GCAAGACCGC GACCGGCCAG CCGTCCACCG CCGAGGCGGT GCTCGCCGAA
CTGGCCGAGC AGGACTTCGA GCTGCCCAAG GTGATCATGC AGTACCGCTC CATGAGCAAG
CTCAAGAGCA CCTACACCGA CCGCCTGCCC GAGCAGATCA ACCCGCGCAC CGGGCGCATC
CATACCTCAT ACCACCAGGC GGTGGCGGCT ACCGGGCGGC TGTCGTCGAG CGACCCGAAC
CTGCAGAACA TCCCGATCCG CACCGCGGAG GGCCGGCGCA TCCGCCAGGC GTTCGTCGCG
CCGCAGGGCT ACAAGCTATT GGCCGCGGAC TACTCGCAGA TCGAGCTGCG GATCATGGCC
CACCTGGCCA AGGACGACGG CCTGCTGGAT GCCTTCCGCC ACGACCTGGA CGTACACCGC
GCCACCGCGG CGGAAGTCTT CGGCGTGCCG CTGGAAGACG TCAGCGGCGA CCAGCGACGC
AGCGCCAAGG CGATCAACTT CGGATTGATC TACGGCATGA GCGCCTTCGG CCTGGCCAAG
CAGATCGGCG TCGAGCGCAA GGAGGCCCAG GCCTACATCG ACCGTTACTT CGCCCGCTAC
CCCGGCGTCC TGGCGTACAT GGAACGGACC CGCGCCCAGG CCGCGGAGCA GGGCTTCGTC
GAAACCCTGT TCGGCCGTCG CCTGTACCTG CCGGAGATCC ATTCGAAGAA CGGTGCCATG
CGCAAGGCCG CCGAGCGCAC CGCGATCAAC GCGCCGATGC AGGGCACCGC GGCGGACATC
ATGAAGCGCG CCATGGTCGC TGTGGATAAC TGGCTGCAGG AAAGCGGCCT CGATGCCCGG
GTGATCCTCC AGGTGCACGA CGAACTGGTG CTGGAAGTGC GCGAGGACCT GGTCGAGCAG
GTGCGCGAGG GAATCCGCCC GCTGATGAGC GGCGCGGCGA CCCTGGACGT ACCGCTGGTG
GTCGAGGCGG GTGTCGGTTC GAACTGGGAC GAAGCCCACT GA
|
|---|
| Protein sequence | MSQAPLVLVD GSSYLYRAFH ALPPLTTSTG KPTGAVKGVL NMLLSLRKQY PDSPFAVVFD
AKGPTFRDEL FAEYKANRPS MPDDLRVQVE PLHASVRALG LPLLCVEGVE ADDVIGTLAR
SSAAAGRPVV ISTGDKDMAQ LVDGHITLVN TMTGSRLDVD GVKEKFGVGP ELIIDFLALM
GDKVDNIPGV PGVGEKTALG LLTGVGGGLE VLYASLDKVP ELPIRGAKGL PAKLEENREQ
AFLSYQLATI KTDVELDVEI DKLYPGEPQR EALIALYREL EFKNWLDDLL REAKEAGENG
EAETPIQAEV DYDVVLDQAG FDAWLKKLEE AELIAFDTET TSIDAQQAQV VGVSFAVKEG
EAAYVPLAHS YMGVPEQLDR DAVLRALKPL LEDPKKLKVG QHAKYDINVL ANASTPIALR
GVAYDTMLES YVLDSTATRH DMDSLALKYL GHSTIRFEDI AGKGAKQLTF DQIAIEQAGP
YAAEDADVTL RLHQALWQKL EAIPSLARVL TDIEMPLVPV LARIERNGAL VDANLLGIQS
RELGEKMVAL ERQAYDLAGQ EFNLGSPKQL GAILYDKLGL PVLSKTATGQ PSTAEAVLAE
LAEQDFELPK VIMQYRSMSK LKSTYTDRLP EQINPRTGRI HTSYHQAVAA TGRLSSSDPN
LQNIPIRTAE GRRIRQAFVA PQGYKLLAAD YSQIELRIMA HLAKDDGLLD AFRHDLDVHR
ATAAEVFGVP LEDVSGDQRR SAKAINFGLI YGMSAFGLAK QIGVERKEAQ AYIDRYFARY
PGVLAYMERT RAQAAEQGFV ETLFGRRLYL PEIHSKNGAM RKAAERTAIN APMQGTAADI
MKRAMVAVDN WLQESGLDAR VILQVHDELV LEVREDLVEQ VREGIRPLMS GAATLDVPLV
VEAGVGSNWD EAH
|
|---|
| |