Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_72390 |
Symbol | |
ID | 4385153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 6447605 |
End bp | 6449392 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639328432 |
Product | putative two-component sensor |
Protein accession | YP_793961 |
Protein GI | 116053634 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATGC CGCTGCCGAT GAAGCTCCGG ACCCGGTTGT TCCTCAGCAT TTCCGCGCTG ATCACCGTCT CGCTGTTCGG CCTGTTGCTC GGGTTGTTCA GCGTGATGCA GCTCGGCCGC GCTCAGGAGC AACGGATGTC GCACCACCAC GCGACCATCG AGGTGAGCCA GCAGTTGCGC CAGCTGCTCG GCGACCAGTT GGTCATACTG CTCCGCGAAA AACCCGACGG GCAGGCCCTG GAGCGCTCGC AGAACGATTT CCGACGGGTC CTGGAACAGG GTCGGGCGAA TACCGTCGAC GGCGCCGAGC AGGCCGCCCT GGATGGCGTT CGCGACGCCT ACCTGCAACT GCAGGCGCAC ACCCCGGCGC TGCTCAAGGC GCCCATGGCC GACAACGACG GCTTCAGCGA AGCCTTCAAT ACCCTGCGCC TGCGCCTGCA GGACCTGCAG CAACTGGCGC TGGCCGGCAT CAGCGACGCC GAGACCAGCG CCCGCCACCG AGCCTACCTG GTCGCCGGCC TGCTTGGCCT GGTGGGCGTC GCCATCCTGC TGATCGGTTT CGTCACCGCC CACAGCATCG CCCGGCGCTT CGGCGCACCG ATCGAAACCC TGGCGCGGGC GGCGGACAGG ATCGGCGAAG GCGATTTCGA CGTGACCCTG CCGATGACCA ACGTCGCCGA GGTCGGCCAG TTGACCCGGC GTTTCGGCCT GATGGCCGAG GCCCTGCGGC AGTACCGCAA GACCAGCGTC GAAGAGGTGC TTTCCGGCGA GCGGCGCCTG CAGGCGGTAC TCGACAGCAT CGACGACGGC CTGGTGATCT TCGACAACCA GGGGCGCATC GAACACGCCA ACCCGGTCGC GATCCGCCAG CTGTTCGTCT CCAACGACCC CCATGGCAAG CGGATCGACG AAATACTCAG CGATGTCGAT GTCCAGGAAG CGGTGGAAAA GGCCCTGCTC GGCGAAGTCC AGGACGAGGC AATGCCCGAC CTGGTGGTGG ACGTCGCCGG CGAGTCGCGC CTGCTGGCCT GGTCGCTGTA TCCGGTCACC CATCCCGGCG GGCATAGCGT CGGCGCGGTG CTGGTGGTCC GCGACGTGAC CGAGCAGCGC GCCTTCGAAC GGGTCCGCAG CGAATTCGTC CTGCGCGCCT CCCACGAACT GCGCACGCCG GTGACCGGCA TGCAGATGGC CTTCAGCCTG CTCCGCGAAC GCCTGGACTT CCCCGCGGAG TCACGGGAAG CGGACCTGAT CCAGACGGTG GACGAAGAGA TGTCGCGGCT GGTCCTGCTG ATCAACGACC TGTTGAACTT CTCGCGCTAC CAGACCGGCA TGCAGAAGCT CGAACTGGCT TCCTGCGACC TCGTCGACCT GCTCACCCAG GCGCAGCAGC GTTTCACTCC CAAGGGCGAG GCCCGCCGGG TCTCGCTGCA ACTGGAGCTG GGCGATGAGC TGCCGCGCCT GCAGCTCGAT CGCCTGCAGA TCGAGCGGGT GATCGACAAC CTGCTGGAAA ACGCCCTGCG CCATAGCAGC GAAGGCGGGC AGATCCACCT GCAGGCCCGG CGCCAGGGCG ACCGGGTGCT GATCGCGGTG GAAGACAATG GCGAAGGCAT TCCCTTCAGC CAGCAAGGAC GGATCTTCGA GCCTTTCGTC CAGGTCGGAC GCAAGAAGGG CGGCGCCGGC CTCGGCCTGG CGCTGTGCAA GGAAATCATC CAGCTGCATG GCGGGCGCAT CGCGGTGCGC TCGCAACCGG GCCAGGGCGC GCGCTTCTAC ATGCTGCTGC CGGTGTGA
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Protein sequence | MSMPLPMKLR TRLFLSISAL ITVSLFGLLL GLFSVMQLGR AQEQRMSHHH ATIEVSQQLR QLLGDQLVIL LREKPDGQAL ERSQNDFRRV LEQGRANTVD GAEQAALDGV RDAYLQLQAH TPALLKAPMA DNDGFSEAFN TLRLRLQDLQ QLALAGISDA ETSARHRAYL VAGLLGLVGV AILLIGFVTA HSIARRFGAP IETLARAADR IGEGDFDVTL PMTNVAEVGQ LTRRFGLMAE ALRQYRKTSV EEVLSGERRL QAVLDSIDDG LVIFDNQGRI EHANPVAIRQ LFVSNDPHGK RIDEILSDVD VQEAVEKALL GEVQDEAMPD LVVDVAGESR LLAWSLYPVT HPGGHSVGAV LVVRDVTEQR AFERVRSEFV LRASHELRTP VTGMQMAFSL LRERLDFPAE SREADLIQTV DEEMSRLVLL INDLLNFSRY QTGMQKLELA SCDLVDLLTQ AQQRFTPKGE ARRVSLQLEL GDELPRLQLD RLQIERVIDN LLENALRHSS EGGQIHLQAR RQGDRVLIAV EDNGEGIPFS QQGRIFEPFV QVGRKKGGAG LGLALCKEII QLHGGRIAVR SQPGQGARFY MLLPV
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