Gene PA14_70980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_70980 
SymbolbetT1 
ID4385079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp6324563 
End bp6326113 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content66% 
IMG OID639328320 
Productcholine transporter BetT 
Protein accessionYP_793849 
Protein GI116053522 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1292] Choline-glycine betaine transporter 
TIGRFAM ID[TIGR00842] choline/carnitine/betaine transport 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.92652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCTTCG GCTCGACCGC ACTGATCCTG GTTCTGACCG CCGCCCTCAT CCTCTATCCC 
GACAGCGCCG GAGCCTTGCT CGGCCGCATC CAGGCGTGGC TGTCGCACAG CTTCGGCTGG
TACTACATGC TGGCCATCGG CGCCTACCTG TTCTTCGTCG CCTGGGTGGC CTTCTCGCGC
TTCGGCACCC TCAAGCTCGG CGAGGAGCAT GAAAAGCCGG ACTTCAGCTA CGGCGCCTGG
GCCGGCATGC TGTTCTCCTC CGGGATCGGC ATCTCGCTGC TCTACTTCGC CGCATCCGAG
CCGATCGACC ACCTCTACCA CCCGCCCGAA GGCGTTCCCG GCAGCCCTCA GGCGGCGCGC
CAGGCGCTGC AACTGACCTT CCTCCACTGG GGCCTGCACG GTTGGGCGAT CTATGCCCTG
GTCGGCCTCG CCGTCGGCTA TTTCGCCTAC CGCCATCGCC AGCCGCTGGC GTTGCGCTCG
GCGCTCTATC CGATCCTCGG CGAGCGCTGG GTGAAAGGCG CCGCGGGCCA CGCGGTGGAT
TGCTTCGGCA TCTTCGTCAC CCTTCTCGGG CTGGTGACCA ACCTGGGCAT CGGCGCCTTG
CAGGTGTCGT CCGGTCTCGA GTACCTGACC GGCATGCCGC ACAGCAAAGG CACCCTGCTG
GCGGTGATCC TCGTGATGAG CCTGGTCGCC ACCCTGGCGG CGGTCTCCGG TATCGAGAAA
GGCATCCGCC GGCTGTCCAA CCTGAATATC GTGCTGTTCA GCTCGCTGCT GCTGTTCGTG
CTGGTCTGCG GTTCGACCCT GGAACTGCTC AACGGCTTCG TACAGAACCT CGGCGACTAT
CTCGACGGCC TGGTGCTGAA GACCTTCGAC CTCTACGTCT ACACCGGTGC CGGCGCCGGC
AAGAGCGAGG AATGGCTGGG CCTGTGGACC CTGTTCTACT GGGCCTGGTG GATTTCCTGG
GCGCCCTTCG TCGGTATGTT CATCGCCCGC ATCTCCCGTG GTCGCAGCGT GCGCGAACTG
GTCTGCGGGG TGCTGCTGAT CCCGCTGGGC TTCACCCTGG CCTGGCTGTC GGTATTCGGC
AACAGCGCCC TGGACCTGGT GATGAACCAC GGCGCGACCG ACCTGGGCAA GGCCGCGCTG
GAACAGCCGT CGATGTCGAT CTACCTGCTG CTGGAACACT ATCCGCTGTC GAAGATCGTC
ATCGGCCTGT CGATCTTCGT CGGCTTCGTG CTGTTCCTCA CCCCGGCGGA TTCCGGCTCG
GTGATGCTGG CCAATCTCTC GCGCAGCGGC GGCGAGCTGG ACGAGGACGC GCCGAACTGG
CTGCGCATCC TCTGGTCGGC CGTCGTCACG CTAGTCACCA TCGGCCTGCT GTTCGCCGGC
AACTTCACGG CGATGCAAAC CGTCGTGGTG CTCGCCGGGC TACCGTTCTC GGCGGTGCTG
ATCCTGTTCA TGTTCGGCCT GCACAAGGCC ATGCGCGCCG ACTACGAGGC CCAGGTCGGC
GACCGCCGCA CCTACCAGCC AGTGCCGGCG CCAACCCAGC ACCAGACCTG A
 
Protein sequence
MFFGSTALIL VLTAALILYP DSAGALLGRI QAWLSHSFGW YYMLAIGAYL FFVAWVAFSR 
FGTLKLGEEH EKPDFSYGAW AGMLFSSGIG ISLLYFAASE PIDHLYHPPE GVPGSPQAAR
QALQLTFLHW GLHGWAIYAL VGLAVGYFAY RHRQPLALRS ALYPILGERW VKGAAGHAVD
CFGIFVTLLG LVTNLGIGAL QVSSGLEYLT GMPHSKGTLL AVILVMSLVA TLAAVSGIEK
GIRRLSNLNI VLFSSLLLFV LVCGSTLELL NGFVQNLGDY LDGLVLKTFD LYVYTGAGAG
KSEEWLGLWT LFYWAWWISW APFVGMFIAR ISRGRSVREL VCGVLLIPLG FTLAWLSVFG
NSALDLVMNH GATDLGKAAL EQPSMSIYLL LEHYPLSKIV IGLSIFVGFV LFLTPADSGS
VMLANLSRSG GELDEDAPNW LRILWSAVVT LVTIGLLFAG NFTAMQTVVV LAGLPFSAVL
ILFMFGLHKA MRADYEAQVG DRRTYQPVPA PTQHQT