| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_70290 |
|---|
| Symbol | |
|---|
| ID | 4385087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 6267659 |
|---|
| End bp | 6268729 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639328264 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_793798 |
|---|
| Protein GI | 116053471 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAACA ATGCCGCCGA TGCGCGCTAC GAACTCGCCC AGGTATCCAC CTTCCTGCTG
CAGACGCTGG CCGAGGTGGT CGAAGGCCAT GGCGTCGATC CCGCGCGGCT GTGCCGGGGC
CTGGGCTTCA CCGTCGAAGA CCTGCAGGAC CCTACCCAGC GCATCTCCTA CCGCCAGGCC
GTGAGCATGA TCCAGCGTGC CCTCCAGGCC CTGCCGGAGC GGGGGCTGGG GCTGTGGGTC
GGACACCAGA ACGTGCTCGG CACCCTTGGC CTGCTGGGCC ATGTGCTGTC GCTGTGCCGG
ACCCTGCGCG ACGCGTTCGA CATCGGCGTG CGCTACCAGC ACAGCTCGGG CGGGATCGTC
ACCTCCAGCG TCTACCAGCA GGGCGAAACC TTCTTCGTCG AGGTCGAATG CCACCTGCCC
AGCAGTGAGG TGCAGGTGTT TGCCATCGAG GAGTTCTTCG CCAGCCTGCT GGTGTATGGG
CGTGCCCTGG TCAGCCCGGC GTTCGAACCG CTGGGCATCG AACTCATCCA TGCCGCTCCG
CCCTACGCGG GCGAGTACCT GCGCCTGCTG GGGCCCCAGG TACGCTTCGG CTGCCTGCAC
AACCGCATGG CGATCGCCAG CCACTGGCTG GACATGCGCC TGCCCAACCA CAACCTGCCG
GCGTTGCGCC AGGCGCTGGC CCTGCTGGAG CAGGAAAGCA CCCAGGTGCA CCGGAAACTC
GACCTGGTCC AGGCGGTGGA ACGGGCCATC GCCCGCGACC TCAGCCTGGG CAGCCAGATC
GAAAGGATTT CCGCCGAACT GAACATGAGC AGCCGCACCC TGCGGCGCCG GCTGGCCGAA
CACGGGCTGA CCTTCGAGGC GTTGCTGGAG CAGGTGCGGC GAGGGCGGGC GATGAGCCTG
CTGGGCAACC CCGGGATGTC CATCGAACGT ATCACCGAGG AAGTGGGATA TCGTGATATC
CGCAGTTTCA GGCGCGCGTT CAAGCGTTGG ACGGGAGTGA GCCCGGCGAC CTTCCGTAGC
GAGGGCACGA GCCCGTTGGA CCAGGTCTTC ACGCTGGCCG CGCGACGCTA A
|
|---|
| Protein sequence | MHNNAADARY ELAQVSTFLL QTLAEVVEGH GVDPARLCRG LGFTVEDLQD PTQRISYRQA
VSMIQRALQA LPERGLGLWV GHQNVLGTLG LLGHVLSLCR TLRDAFDIGV RYQHSSGGIV
TSSVYQQGET FFVEVECHLP SSEVQVFAIE EFFASLLVYG RALVSPAFEP LGIELIHAAP
PYAGEYLRLL GPQVRFGCLH NRMAIASHWL DMRLPNHNLP ALRQALALLE QESTQVHRKL
DLVQAVERAI ARDLSLGSQI ERISAELNMS SRTLRRRLAE HGLTFEALLE QVRRGRAMSL
LGNPGMSIER ITEEVGYRDI RSFRRAFKRW TGVSPATFRS EGTSPLDQVF TLAARR
|
|---|
| |