Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_69550 |
Symbol | |
ID | 4385050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 6203853 |
End bp | 6205895 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639328206 |
Product | hypothetical protein |
Protein accession | YP_793740 |
Protein GI | 116053415 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.256731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.401785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGCAG CAGCCAACCA GACCCATTTC AGCCTCGCCA TCGACGGCCT CGCCCTCGAC CTGCAGGTGC TCTCCTTCAG CGGCCGCGAA GCCATCAGCC AGCCGTTCGC CTTCGACCTG GAGCTGGTCG GCGAACGCCC CGTGCCGGAC CTCGAAAGCC TGCTGCACAA ACCCGCCTTC CTTACCCTCG GGCCCGCCGG CAACGGTATC CACGGCCTGG TGCGCAGCGC CGGACAGGGC GACTCGGGCA AGCGCCTGAC CCGCTACCGC ATCACCCTCG TCCCGCAACT GGCCTACCTC GCCCAGCGCA CCAACCAGCG CATCTTCCAG CACCTCACGG TGCCGCAGAT CGTCGGCCGG GTGCTGGAGG AACACGGCAT CCTCGCCGAC GCCTACCGCT TCCAGCTCGG CACCCGCTAC CCCGAGCGCG AATACTGCGT GCAGTACGAC GAGAGCGACC TGCAGTTCGT CCAGCGCCTG TGCTGCGAGG AGGGCATCCA CTTTCATTTC CAGCACAGCG CCACGGCGCA CCTGCTGGTA TTCGGCGACG ACCAGACGGT GTTCCCGCGG CTCGCGCCGG TGGCCTACCA GCAGGACTCC GGCCTGGTCG CCGACCGGCC GGCGGTCAAG CGCTTCGGCG TACGCCTGGA AACCCGCACC AGCCGCGTCA CCCGCCGCGA CTACGACTTC GAGAAACCGC GCCTGACGCT GGAAAGCGCC GCCCGCGGCG AAGCCCGGCC GGACCTCGAG GACTACGACT ATCCCGGTCG CTTCGTCGAC CGCGAGCGCG GCAAGCACCT GGCCAGGCGT GCCCTCGAAC GGCAGCGCAG CGACTACCGC CTGGCCGAGG GCCGCAGCGA CCAACCGTTG CTGCTCAGCG GCCACTTCCT GCCGCTGGCC GCCCATCCCC AGGCGGGCTG GAACGACCTC TGGCTGCTCA CCGAGGTGAT TCACGAGGGG CGGCAGCCGC AGGTGCTGGA AGAAAGCATC GTCTCCGACA CCTCGGCGAG CCCGGACGAC TTCCGGCAGG GTTACCGCAA CCGCTTCCAG GCCACGCCCT GGGAGGCGTT CTTCCGTCCC CCGCTGACAC CGCCGAAGCC GCGCATCCTC GGCACGCAGA GCGCGGTGGT GACCGGTCCG AAGGGCGAGG AAATCCACTG CGACCGCTAC GGTCGGGTGA AGGTGCAATT CCACTGGGAT CGCGAGGGCC AGGCCGACGA CAGCAGCAGT TGCTGGTTAC GCGTTGCCTC CGGCTGGGCG GGAAGGAACT ACGGCGCCAT CGCCATCCCG CGGGTCGGCA TGGAGGTGCT GGTGACCTTC CTCGAAGGCG ACCCCGACCA GCCGCTGGTC ACCGGCTGCC TGTTCCACAG GGAACATCCG GTGCCCTACG AACTGCCGGC GCACAAGACC CGCAGCGTCT TCAAGAGCCT CAGCAGCCCT GGCGGCGGTG GCTACAACGA GCTGCGCATC GAGGACCGCA AGGGCCAGGA GCAGATCTTC GTCCATGCCC AGCGCGACTG GGACGAAAAC ATCCAGCACG ACCAGAAGAT CCGCGTCGGT CACCAACGCC ACGACACCGT GGAGGCGAAC AGCTACAGCG AGTTCAAGGC CGAGGAACAC CGCACCACCC ACGCCGAGCG CAAGGTGGAG GTCCGCGCCA GCGACCACCT CACCGTAGCC AACGACCAGC ACCTGAAGAT CGCCAGCGGC CAGTTCGTCG AGGCCGGCCA GGAGATCCAC CTGAGCAGCG GTCTGAAGGT GGTGCTGGAG GCCGGCGCCG AACTGACCCT CAAGGGCGGC GGCAGCTTCC TCAAGCTCGA CGCCAGCGGC GTGACCCTCT CCGGGGCCAA CGTCCGGGTC AACTCCGGCG GCAGCCCGGG CAACGGCAGC GGCGCGGCGC CGCTGTTGCC GGGGCCGCTG CGGCAGGCCG ACAGCGACAA GGCCGGCGCC CTGCTGATCC GCGCGCAGCG CCAGGCATTG CTGCAGAAGA AACCGATCTG CGCCATCTGC GAAGCGGCCA GGGCGAAAAC CGATGCGCAC TGA
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Protein sequence | MFAAANQTHF SLAIDGLALD LQVLSFSGRE AISQPFAFDL ELVGERPVPD LESLLHKPAF LTLGPAGNGI HGLVRSAGQG DSGKRLTRYR ITLVPQLAYL AQRTNQRIFQ HLTVPQIVGR VLEEHGILAD AYRFQLGTRY PEREYCVQYD ESDLQFVQRL CCEEGIHFHF QHSATAHLLV FGDDQTVFPR LAPVAYQQDS GLVADRPAVK RFGVRLETRT SRVTRRDYDF EKPRLTLESA ARGEARPDLE DYDYPGRFVD RERGKHLARR ALERQRSDYR LAEGRSDQPL LLSGHFLPLA AHPQAGWNDL WLLTEVIHEG RQPQVLEESI VSDTSASPDD FRQGYRNRFQ ATPWEAFFRP PLTPPKPRIL GTQSAVVTGP KGEEIHCDRY GRVKVQFHWD REGQADDSSS CWLRVASGWA GRNYGAIAIP RVGMEVLVTF LEGDPDQPLV TGCLFHREHP VPYELPAHKT RSVFKSLSSP GGGGYNELRI EDRKGQEQIF VHAQRDWDEN IQHDQKIRVG HQRHDTVEAN SYSEFKAEEH RTTHAERKVE VRASDHLTVA NDQHLKIASG QFVEAGQEIH LSSGLKVVLE AGAELTLKGG GSFLKLDASG VTLSGANVRV NSGGSPGNGS GAAPLLPGPL RQADSDKAGA LLIRAQRQAL LQKKPICAIC EAARAKTDAH
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