| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_68300 |
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| Symbol | arcD |
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| ID | 4384391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 6093086 |
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| End bp | 6094534 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639328107 |
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| Product | arginine/ornithine antiporter |
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| Protein accession | YP_793641 |
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| Protein GI | 116053317 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000378428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.106229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAG AATCCAGCCA AAAACTCCGA CTAGGAGCGC TAACGGCTCT GGTTGTCGGC
TCGATGATCG GAGGGGGCAT CTTCTCCCTT CCGCAAAACA TGGCAGCCAG CGCCGACGTC
GGCGCCGTCC TGATCGGATG GGCGATCACC GCCGTCGGCA TGCTCACCCT CGCTTTCGTC
TTCCAGACCC TCGCCAACCG CAAGCCCGAA CTCGACGGCG GCGTGTACGC CTACGCCAAG
GCCGGCTTCG GCGACTACAT GGGTTTCTCC TCGGCCTGGG GCTACTGGAT CAGCGCCTGG
CTGGGCAACG TCGGCTACTT CGTCCTGTTG TTCAGCACCC TCGGCTACTT CTTCCCGATC
TTCGGCAAGG GCGACACCGT CGCCGCGATC GTCTGCGCCT CGGTCCTGCT CTGGGCCCTG
CATTTCCTGG TGCTGCGCGG GATCAAGGAG GCGGCGTTCA TCAACACCGT CACCACCGTG
GCCAAGATCG TGCCGCTGTT CCTGTTCATC CTGATCTGCC TGTTCGCCTT CAAGCTGGAC
ATCTTCACCG CCGACATCTG GGGCAAGAGC AACCCGGACC TGGGCAGCGT GATGAACCAG
GTGCGCAACA TGATGCTGGT CACCGTCTGG GTGTTCATCG GCATCGAGGG CGCGAGCATC
TTCTCCTCCC GCGCGGAAAA ACGTTCCGAC GTCGGCAAGG CCACCGTGAT CGGCTTCATC
ACCGTCCTGC TCCTGCTGGT GCTGGTCAAC GTGCTGTCCA TGGGCGTGAT GACCCAGCCG
GAACTGGCCA AGCTGCAGAA CCCGTCGATG GCGCTGGTAC TCGAGCATGT GGTCGGCCAC
TGGGGCGCCG TGCTGATCAG CGTCGGCCTG CTGATCTCGC TGCTGGGCGC GCTGCTCTCC
TGGGTGCTGC TGTGCGCCGA GATCATGTTC GCCGCGGCCA AGGACCACAC CATGCCGGAG
TTCCTGCGCC GCGAGAACGC CAACCAGGTG CCGGCCAACG CCCTGTGGCT GACCAACATC
TGCGTACAGG TGTTCCTGGT GGTGGTGTTC TTCACCTCGG GCGACCCGGA CGGCATGGAC
CCGTACACCA AGATGCTGCT CCTGGCCACC TCGATGATCC TGATTCCGTA CTTCTGGTCC
GCCGCCTATG GCCTGCTGTT GACCCTGAAG GGCGAGACCT ACGAGAACGA TGCCCGCGAA
CGCAGCAAGG ACCTGGTCAT CGCCGGCATC GCTGTGGTCT ACGCGGTCTG GCTGCTCTAC
GCCGGTGGCC TGAAGTACCT GCTGCTGTCC GCCCTGCTGT ATGCGCCCGG CGCGATCCTC
TTCGCCAAGG CCAAGCACGA GGTCGGCCAG CCGATCTTCA CCGGAATCGA AAAACTGATC
TTCGCCGCAG TCGTCATTGG CGCCCTGGTG GCTGCCTACG GCCTCTACGA CGGTTTCCTC
ACCCTCTGA
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| Protein sequence | MSQESSQKLR LGALTALVVG SMIGGGIFSL PQNMAASADV GAVLIGWAIT AVGMLTLAFV
FQTLANRKPE LDGGVYAYAK AGFGDYMGFS SAWGYWISAW LGNVGYFVLL FSTLGYFFPI
FGKGDTVAAI VCASVLLWAL HFLVLRGIKE AAFINTVTTV AKIVPLFLFI LICLFAFKLD
IFTADIWGKS NPDLGSVMNQ VRNMMLVTVW VFIGIEGASI FSSRAEKRSD VGKATVIGFI
TVLLLLVLVN VLSMGVMTQP ELAKLQNPSM ALVLEHVVGH WGAVLISVGL LISLLGALLS
WVLLCAEIMF AAAKDHTMPE FLRRENANQV PANALWLTNI CVQVFLVVVF FTSGDPDGMD
PYTKMLLLAT SMILIPYFWS AAYGLLLTLK GETYENDARE RSKDLVIAGI AVVYAVWLLY
AGGLKYLLLS ALLYAPGAIL FAKAKHEVGQ PIFTGIEKLI FAAVVIGALV AAYGLYDGFL
TL
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