Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_67230 |
Symbol | |
ID | 4383402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 6001732 |
End bp | 6004104 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639328024 |
Product | hypothetical protein |
Protein accession | YP_793560 |
Protein GI | 116053237 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGCCC CCGCCAACCA GACGCACTTC AGCCTTCGCA TCGAAAACCT CCGGCACGAC TTCCAGGTAC TCGCCTTCCG CGGTCGCGAA GCCATCAGCC AGCCCTTTCG CTTCGACCTG GAGCTGGTCA GCGAGCGATC CGACCTGGAC CTCGACGCGC TGCTGCACCA GCCGGCCTTC CTGATCCTCT CGCCGAGCGG GCAAGGGGTC CACGGACAGC TCACCAGCAT CGCCCAGGGG GACTCCGGCA AGCGCCTGAC CGGCTATCGC GCGACCCTGG AGCCGCGCCT GGCCTACCTG GGGCTGTGCA GCGACCAACG CATCTTCCAG CGCCTCAGCG TGCCGGAAAT CATCGGCCGG GTGCTGGAGG GCCACGGCAT TCTCGCCGAC GCCTACCGCT TCCAGCTGGG CCCGACGCCG TACCCGGCCC GCGAATACTG CACGCAGTAC GACGAAACCG ACCTGGCGTT CCTCAGCAGG CTCTGCGAGG AGGAAGGCAT CCATTACCAC CATGAGTTTT CTGCCCAGGG CCATATGCTG GTCTTCGGCG ACGACCAGAC CTCCTTTCCG CGGCTGCAAC GCCCCGTCGC CTACGTGCAG GACGCCGGGC TGGTCGCCGA CCAGCCGGTG GTCAAGCGCT TCGGCGTGCG CTTCGACACC CGTGCCAGCC GGGTTACCCG GCGCGACTAC GACTTCGAGC AACCCGCGTT GCAGATGCAG GCCGCCCATG GCCCGCAGCC CGGGGCGCAG CAACCGGACC TGGAGGACTA CGACTATCCC GGCCGCTTCA CCCACCGCGA GCGCGGCAAG CACCTGAGCC GGCGCGCGCT GGAACGGCAT CGCGCCGACT ACCTACAGGC CAGGGGCGAA AGCGACGAAC CGGCGCTGCT CAGCGGACAC TTCCTGACGC TGTCCGCGCA TCCCTGCGGC GAATGGAACG ATCTCTGGCT GCTTACTGAG GTTCTCCACG AAGGGCGGCA GCCGCAGGTA CTGGAAGAGT CGATCGACAG CGACGTCGCG CAGGGCCGGG GCGATTTCCG CCAGGGCTAT CGCAACCGTT TCGTCGCCAC TCCCTGGAGC GCGCATTTCC GCCCCCCGCT GGAGCATCCC AGGCCACGCG TGCTGGGCTG CCAGACAGCG GTCGTGACCG GCCCCGCCGG CGAGACCATC CACTGCGACC AATACGGCCG GGTCAAGGTG CAGTTCTTCT GGGATCGCCT CGGCCAGGCC GACGACAACA CCAGTTGCTG GTTGCGCGTC GCCTCCAACT GGGCGGGCAA ACGCTATGGC GGCGTCGCCA TCCCGCGGGT GGGCATGGAA GTCCTGGTGG GTTTCCTGGA GGGCGATCCG GATCAGCCGC TGGTCACCGG CTGCCTCTAC CACAGCGAAA ACCGGGTGCC CTACGAACTG CCGCAGAACA AGACCCGCAG CGTTTTCAAG ACCGACAGCT ACCCCGGCGG CGGCGGTTTC AACGAACTGC GCATCGAGGA CCGCAAGGGC CAGGAACAGA TCTTCGTCCA CGCCCAGCGC GACTGGGACG AGAACATCGA GCACGACCAG AAGATCCGCG TCGGCCATGA GCGCCACGAC ACGGTCGAGG GCGATAGCTA CAGCGAGTTC AGGGCCGAGG AACAGCGCAC GGTCCACGCC GACCGCAAGG TCGAACTGAA GGCGGCCGAC CACCTCAGCG TCGCCGACGC GTTGCACCTG AGGATCGGCA CCGGCCAGTT CGTCGAGGCG GGCGACGAGA TCCATTTCAA GGCCGGCGAC AAGGTAGTGA TCGAGGCAGG CATGGAGCTG ACCCTAAAGG GCGGTGGCAG CTTCGCCAGG CTCGACCCGG GCGGTGTCAC CCTTGACGGC GCCCAGGTGA TGATCAACAG CGGCGGCAGC CCCGGCATCG GTAGCGGCGT TCGCGCGCTG TCGCCGCTGC AACCGCTCGC GGCCGACGCC GCGGCGGCGG GAGGCGCCTT GTTGGGAGCC ATCGCCCAGA AGATCGGCGA AGCGCCGCAG AAACTCCTGC GTTTCGAACT CAGTCCGTTG CCCGGCGTGG CATCGGCGGC CAGGCAACCG TATCGGCTCT ACGCCAACGG TGCCCTCAAG GAGGAGGGCA TCGCCGACGA AGGCGGCGCA ATCAGCTTCG AACCGCTTCC GGGCGAACGC ACCTATCGTA TCGAGACGGC CAATGGCCAC GCCTACGAAG TGGAGATGGT CGACCGGCCG GACGCACTGC AGGTCGACGA TCGGCTCGCC CAACAGGGGT TCCGCGACTA CCGGGCGGAA ATGCCCCAGC ACAAGCCGCG TTCCGCCCCG GACGCCTACC GGCGCGACGC CTCGCGGCCC GGCGCCGCCG ACAAGGATGA CCCCACGCCA TGA
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Protein sequence | MFAPANQTHF SLRIENLRHD FQVLAFRGRE AISQPFRFDL ELVSERSDLD LDALLHQPAF LILSPSGQGV HGQLTSIAQG DSGKRLTGYR ATLEPRLAYL GLCSDQRIFQ RLSVPEIIGR VLEGHGILAD AYRFQLGPTP YPAREYCTQY DETDLAFLSR LCEEEGIHYH HEFSAQGHML VFGDDQTSFP RLQRPVAYVQ DAGLVADQPV VKRFGVRFDT RASRVTRRDY DFEQPALQMQ AAHGPQPGAQ QPDLEDYDYP GRFTHRERGK HLSRRALERH RADYLQARGE SDEPALLSGH FLTLSAHPCG EWNDLWLLTE VLHEGRQPQV LEESIDSDVA QGRGDFRQGY RNRFVATPWS AHFRPPLEHP RPRVLGCQTA VVTGPAGETI HCDQYGRVKV QFFWDRLGQA DDNTSCWLRV ASNWAGKRYG GVAIPRVGME VLVGFLEGDP DQPLVTGCLY HSENRVPYEL PQNKTRSVFK TDSYPGGGGF NELRIEDRKG QEQIFVHAQR DWDENIEHDQ KIRVGHERHD TVEGDSYSEF RAEEQRTVHA DRKVELKAAD HLSVADALHL RIGTGQFVEA GDEIHFKAGD KVVIEAGMEL TLKGGGSFAR LDPGGVTLDG AQVMINSGGS PGIGSGVRAL SPLQPLAADA AAAGGALLGA IAQKIGEAPQ KLLRFELSPL PGVASAARQP YRLYANGALK EEGIADEGGA ISFEPLPGER TYRIETANGH AYEVEMVDRP DALQVDDRLA QQGFRDYRAE MPQHKPRSAP DAYRRDASRP GAADKDDPTP
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