| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_66350 |
|---|
| Symbol | |
|---|
| ID | 4385443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 5916990 |
|---|
| End bp | 5918792 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639327953 |
|---|
| Product | putative acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_793489 |
|---|
| Protein GI | 116053168 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 78 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAA CCCTGCTCAG TTCCCGCAAC CTGGCGTTCG AGCTGTACGA AGTCCTCGAT
GCCGAAGCCC TGACCCAGCG CCCGCGCTTC GCCGAACATA GCCGCGAAAC CTTCGATGCC
GCCCTCGGCA CCGCGCGGAG CCTGGCGGAA AAGCTGTTCG CCCCGCACAA CCGCAAGGGC
GACGAACACG AGCCGCTCTA TGAGAATGGC TCAGCCACGC TGATTCCGGA AGTGAAGCCG
GCAGTGGATG CCTTCCTCGA CGCCGGCTTC CTCAACGCCA CCCGCAGCTT CGAGCAAGGC
GGCATGCAGT TGCCGACCCT GCTGTCGCAG GCCTGCTTCG CCCACTTCCA GGCAGCCAAC
GTCGGTAGCT CGGCCTATCC GTTCCTGACC ATGGGCGCCG CCAACCTGAT CGAGAGCTTC
GGCAGCGAGG AGCAGAAGCA GCGCTTCCTG CAACCGATGA TCGAGGGCCG CTTCTTCGGC
ACCATGGCCC TCACCGAACC GCACGCCGGC TCCTCCCTCT CCGACATCCG CACCCGCGCC
GAACCGGCTG CCGACGGCAG CTATCGGATC AAGGGCAACA AGATCTTCAT CTCCGGCGGC
GACCACCCGC TCTCCGAGAA CATCGTGCAT ATGGTCCTGG CCAAGCTGCC GGATGCACCG
CCGGGGGTGA AAGGCATCTC GCTGTTCATC GTGCCGAAGT TCCTGGTCAA CGCCGACGGC
AGCCTAGGGC CGCGCAACGA CGTGATCCTC GCCGGCCTGT TCCACAAGAT GGGTTATCGC
GGCACCACCT CCACCGCGCT GAACTTCGGC GACAACGGCG CCTGCGTCGG CTACCTGGTG
GGCAAGCCGC ACCACGGCCT GGCCTACATG TTCCAGATGA TGAACGAGGC GCGCATCGGC
GTCGGCATGG GCGCGGTGAT GCTTGGCTAT GCCGGTTACC TCTATTCGCT GGAGTACGCC
CGCGAACGCC CGCAGGGCCG CCTGCCGGAC GGCAAGGACC CGAGCGCGCC ACAGGTGGCA
ATCATCCGCC ACGCCGACGT GCGGCGCATG CTGCTGACCC AGAAGGCCTA TGTCGAAGGC
GCCTTCGACC TGGGCCTGTA CGCCGCGCGC CTGTTCGACG ACAGCCAGAC CCTGGAGGAC
GACGAACAGC GCCGCCAGGC CCACGAACTG CTCGACCTGC TGACCCCGAT CGTCAAGTCC
TGGCCCTCGG AGTTCTGCCT GAAGGCCAAC GAGCTGGCGA TCCAGATCCT CGGCGGCCAC
GGCTACACCC GCGAATACCC GGTGGAACAG TACTACCGCG ACAATCGCCT GAACCCGATC
CACGAAGGCA CCCACGGCAT CCAGTCCCTC GACCTGCTGG GACGCAAGGT CGGGCAGAAC
AACGGCGCCG GCCTGCGCCA GCTGACCCGC CTGATCCAGG ACGCCTGCCG GCGCGCCGAA
GCCCATCCAT CCCTGGCCGC CCTGCGCCAG CCGCTGGAAC GGCTGGTGGC GCGGCTGTCC
GAAGTGACCC TGGCACTGCT CGGCGACCTG ATGCAGGGCC AGGTCAACCA GGGCCTGGCC
AACTCGGCGC TGTACCTGAA GGTGTTCGGC CATGCGGTGA TCGGCTGGCG CTGGCTGGAG
CAGGCGATCC GCGCCGAGGA AGGGCTGGCT CGCGGCGACT GCGCCGACGC CGACTTCTAT
CGCGGCAAGT TGCAGGCCGC TCGCTACTTC CTGACCTGGG AAGTGCCTGG CTGCCACCAC
GAACTGGCGC TGCTGGAGGC CCGCGACGAC GTGTGTTCGA GCATGCAGGA AGAATGGTTC
TGA
|
|---|
| Protein sequence | MSETLLSSRN LAFELYEVLD AEALTQRPRF AEHSRETFDA ALGTARSLAE KLFAPHNRKG
DEHEPLYENG SATLIPEVKP AVDAFLDAGF LNATRSFEQG GMQLPTLLSQ ACFAHFQAAN
VGSSAYPFLT MGAANLIESF GSEEQKQRFL QPMIEGRFFG TMALTEPHAG SSLSDIRTRA
EPAADGSYRI KGNKIFISGG DHPLSENIVH MVLAKLPDAP PGVKGISLFI VPKFLVNADG
SLGPRNDVIL AGLFHKMGYR GTTSTALNFG DNGACVGYLV GKPHHGLAYM FQMMNEARIG
VGMGAVMLGY AGYLYSLEYA RERPQGRLPD GKDPSAPQVA IIRHADVRRM LLTQKAYVEG
AFDLGLYAAR LFDDSQTLED DEQRRQAHEL LDLLTPIVKS WPSEFCLKAN ELAIQILGGH
GYTREYPVEQ YYRDNRLNPI HEGTHGIQSL DLLGRKVGQN NGAGLRQLTR LIQDACRRAE
AHPSLAALRQ PLERLVARLS EVTLALLGDL MQGQVNQGLA NSALYLKVFG HAVIGWRWLE
QAIRAEEGLA RGDCADADFY RGKLQAARYF LTWEVPGCHH ELALLEARDD VCSSMQEEWF
|
|---|
| |