Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_66350 |
Symbol | |
ID | 4385443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5916990 |
End bp | 5918792 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639327953 |
Product | putative acyl-CoA dehydrogenase |
Protein accession | YP_793489 |
Protein GI | 116053168 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAA CCCTGCTCAG TTCCCGCAAC CTGGCGTTCG AGCTGTACGA AGTCCTCGAT GCCGAAGCCC TGACCCAGCG CCCGCGCTTC GCCGAACATA GCCGCGAAAC CTTCGATGCC GCCCTCGGCA CCGCGCGGAG CCTGGCGGAA AAGCTGTTCG CCCCGCACAA CCGCAAGGGC GACGAACACG AGCCGCTCTA TGAGAATGGC TCAGCCACGC TGATTCCGGA AGTGAAGCCG GCAGTGGATG CCTTCCTCGA CGCCGGCTTC CTCAACGCCA CCCGCAGCTT CGAGCAAGGC GGCATGCAGT TGCCGACCCT GCTGTCGCAG GCCTGCTTCG CCCACTTCCA GGCAGCCAAC GTCGGTAGCT CGGCCTATCC GTTCCTGACC ATGGGCGCCG CCAACCTGAT CGAGAGCTTC GGCAGCGAGG AGCAGAAGCA GCGCTTCCTG CAACCGATGA TCGAGGGCCG CTTCTTCGGC ACCATGGCCC TCACCGAACC GCACGCCGGC TCCTCCCTCT CCGACATCCG CACCCGCGCC GAACCGGCTG CCGACGGCAG CTATCGGATC AAGGGCAACA AGATCTTCAT CTCCGGCGGC GACCACCCGC TCTCCGAGAA CATCGTGCAT ATGGTCCTGG CCAAGCTGCC GGATGCACCG CCGGGGGTGA AAGGCATCTC GCTGTTCATC GTGCCGAAGT TCCTGGTCAA CGCCGACGGC AGCCTAGGGC CGCGCAACGA CGTGATCCTC GCCGGCCTGT TCCACAAGAT GGGTTATCGC GGCACCACCT CCACCGCGCT GAACTTCGGC GACAACGGCG CCTGCGTCGG CTACCTGGTG GGCAAGCCGC ACCACGGCCT GGCCTACATG TTCCAGATGA TGAACGAGGC GCGCATCGGC GTCGGCATGG GCGCGGTGAT GCTTGGCTAT GCCGGTTACC TCTATTCGCT GGAGTACGCC CGCGAACGCC CGCAGGGCCG CCTGCCGGAC GGCAAGGACC CGAGCGCGCC ACAGGTGGCA ATCATCCGCC ACGCCGACGT GCGGCGCATG CTGCTGACCC AGAAGGCCTA TGTCGAAGGC GCCTTCGACC TGGGCCTGTA CGCCGCGCGC CTGTTCGACG ACAGCCAGAC CCTGGAGGAC GACGAACAGC GCCGCCAGGC CCACGAACTG CTCGACCTGC TGACCCCGAT CGTCAAGTCC TGGCCCTCGG AGTTCTGCCT GAAGGCCAAC GAGCTGGCGA TCCAGATCCT CGGCGGCCAC GGCTACACCC GCGAATACCC GGTGGAACAG TACTACCGCG ACAATCGCCT GAACCCGATC CACGAAGGCA CCCACGGCAT CCAGTCCCTC GACCTGCTGG GACGCAAGGT CGGGCAGAAC AACGGCGCCG GCCTGCGCCA GCTGACCCGC CTGATCCAGG ACGCCTGCCG GCGCGCCGAA GCCCATCCAT CCCTGGCCGC CCTGCGCCAG CCGCTGGAAC GGCTGGTGGC GCGGCTGTCC GAAGTGACCC TGGCACTGCT CGGCGACCTG ATGCAGGGCC AGGTCAACCA GGGCCTGGCC AACTCGGCGC TGTACCTGAA GGTGTTCGGC CATGCGGTGA TCGGCTGGCG CTGGCTGGAG CAGGCGATCC GCGCCGAGGA AGGGCTGGCT CGCGGCGACT GCGCCGACGC CGACTTCTAT CGCGGCAAGT TGCAGGCCGC TCGCTACTTC CTGACCTGGG AAGTGCCTGG CTGCCACCAC GAACTGGCGC TGCTGGAGGC CCGCGACGAC GTGTGTTCGA GCATGCAGGA AGAATGGTTC TGA
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Protein sequence | MSETLLSSRN LAFELYEVLD AEALTQRPRF AEHSRETFDA ALGTARSLAE KLFAPHNRKG DEHEPLYENG SATLIPEVKP AVDAFLDAGF LNATRSFEQG GMQLPTLLSQ ACFAHFQAAN VGSSAYPFLT MGAANLIESF GSEEQKQRFL QPMIEGRFFG TMALTEPHAG SSLSDIRTRA EPAADGSYRI KGNKIFISGG DHPLSENIVH MVLAKLPDAP PGVKGISLFI VPKFLVNADG SLGPRNDVIL AGLFHKMGYR GTTSTALNFG DNGACVGYLV GKPHHGLAYM FQMMNEARIG VGMGAVMLGY AGYLYSLEYA RERPQGRLPD GKDPSAPQVA IIRHADVRRM LLTQKAYVEG AFDLGLYAAR LFDDSQTLED DEQRRQAHEL LDLLTPIVKS WPSEFCLKAN ELAIQILGGH GYTREYPVEQ YYRDNRLNPI HEGTHGIQSL DLLGRKVGQN NGAGLRQLTR LIQDACRRAE AHPSLAALRQ PLERLVARLS EVTLALLGDL MQGQVNQGLA NSALYLKVFG HAVIGWRWLE QAIRAEEGLA RGDCADADFY RGKLQAARYF LTWEVPGCHH ELALLEARDD VCSSMQEEWF
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