Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_65750 |
Symbol | |
ID | 4384818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5855497 |
End bp | 5856945 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639327906 |
Product | putative outer membrane efflux protein precursor |
Protein accession | YP_793442 |
Protein GI | 116053122 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 92 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCA GACTCTCCCT GGCGGCCGCC GTGGCCGCTG CTACCGGTGT CGCCTGGGCC GCCCAGCCGA CCCCGCTGCC GACCAAGACC GACCTGATCA GCGTCTACAA GGAAGCCGTC GACAACAACG CCGACCTCGC CGCCGCCCAG GCCGACTACC TGGCGCGCAA GGAAGTGGTG CCCCAGGCCC GCGCCGGCCT GCTGCCGCAA CTCGGCGCCG GCGCCCGCGT CGGAGACACC CGGATCGCAT TCGACGAGCG TCCGGCGACC GTCAAGCGCA ACAGCCAGGT CGTCCAGGCC ACCCTCAGCC AGCCGTTGTT CCGCGCCGAC CGCTGGTTCC AGTGGCAGGC CGCCAAGGAA ACCAGCGACC AGGCCCGGCT GGAATTCTCC GCGACCCAGC AGGACCTGAT CCTGCGCAGC GCCGAGACCT ACTTCACGGT GCTCCGCGCC CAGGACAACC TAGCCACCAG CAAGGCCGAG GAAGCCGCCT TCAAGCGCCA GCTGGACCAG GCAAACGAGC GCTTCGACGT GGGCCTTTCC GACAAGACCG ACGTGCTCGA GGCCCAGGCC AGCTACGACA CAGCCCGCGC CAACCGGCTG ATCGCCGAAC AGCGCGTGGA CGATGCCTTC CAGGCCCTGG TGACCCTGAC CAACCGCGAT TACAGCGCCA TCGAGGGCAT GCGCCACACC CTGCCAGTGG TGCCGCCGGC GCCGAACGAC GCCAAGGCCT GGGTCGACAC CGCGGTGCAG CAGAACCTGC GCCTGCTGGC CAGCAACTAC GCGGTCAACG CCGCCGAGGA AACCCTCCGC CAGCGCAAGG CCGGGCACCT GCCGACCCTC GATGCCGTGG CCCAGTACCA GAAGGGCGAC AACGACGCCC TCGGCTTCGC CAACAGCGCC GCCAATCCGC TGGTGCACTA TGGCAAGTAT GTCGATGAGC GCAGCATTGG CCTGGAACTG AACATCCCGA TCTACAGCGG CGGCCTGACC TCCTCCCAGG TCCGCGAGTC CTACCAGCGC CTCAACCAGA GCGAGCAGTC CCGCGAAGGC CAGCGCCGCC AGGTGGTGCA GGACACCCGC AACCTGCACC GCGCGGTGAA TACCGACGTC GAGCAGGTCC AGGCGCGGCG CCAGGCGATC ATCTCCAACC AGAGTTCGCT GGAAGCCACC GAGATCGGCT ACCAGGTCGG CACCCGCAAC ATCGTCGACG TGCTCAACGC CCAGCGCCAG CTGTACGCCG CCGTGCGCGA CTACAACAAC AGCCGCTACG ACTACATCCT CGATACCCTG CGCCTGAAGC AGGCGGCCGG CACCCTCAGC CCGGCCGACC TGGAGGCGCT CAGCGCCTAC CTGAAGCAGG ATTACGATCC GGACAAGGAC TTCCTCCCGC CGGACCTGGC CAAGGCCGCC GCCGAGCAGT TACAGAGCAA GCCGCGCCAG CAGTACTAG
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Protein sequence | MLRRLSLAAA VAAATGVAWA AQPTPLPTKT DLISVYKEAV DNNADLAAAQ ADYLARKEVV PQARAGLLPQ LGAGARVGDT RIAFDERPAT VKRNSQVVQA TLSQPLFRAD RWFQWQAAKE TSDQARLEFS ATQQDLILRS AETYFTVLRA QDNLATSKAE EAAFKRQLDQ ANERFDVGLS DKTDVLEAQA SYDTARANRL IAEQRVDDAF QALVTLTNRD YSAIEGMRHT LPVVPPAPND AKAWVDTAVQ QNLRLLASNY AVNAAEETLR QRKAGHLPTL DAVAQYQKGD NDALGFANSA ANPLVHYGKY VDERSIGLEL NIPIYSGGLT SSQVRESYQR LNQSEQSREG QRRQVVQDTR NLHRAVNTDV EQVQARRQAI ISNQSSLEAT EIGYQVGTRN IVDVLNAQRQ LYAAVRDYNN SRYDYILDTL RLKQAAGTLS PADLEALSAY LKQDYDPDKD FLPPDLAKAA AEQLQSKPRQ QY
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