| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_64720 |
|---|
| Symbol | |
|---|
| ID | 4384821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 5765866 |
|---|
| End bp | 5767119 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639327828 |
|---|
| Product | putative porin |
|---|
| Protein accession | YP_793366 |
|---|
| Protein GI | 116053047 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.916486 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCC GTCGTAAAAC CGCAATCCCG CGCAATGCAG GGGCGGTCCT GCCGATGCTC
GCCTGTCTTG CCGCGCAAGC TGCCGAGGGC GGCTTCCTGC AGGATGCGAA GACTGACCTG
GTCCTGCGCA ACTATTACTT CAACCGCGAT TTCCGCGACC ACGATGCCGG CAAGAGCCTG
GTGGACGAGT GGGCGCAGGG CTTCATCCTC AAGTTCAGTT CCGGCTATAC CCCGGGCACG
GTCGGCGTCG GCCTCGACGC CATCGGCCTG TTCGGCGTGA AGCTGAACAG CGGACGTGGC
ACCAGCAATT CCGAGCTTCT TCCGTTGCAC GATGATGGTC GCGCGGCGGA CGACTATGGG
CGTGTCGGCG TGGCCGCCAA GCTGCGCGTT TCGGCCAGCG AATTGAAGAT CGGCGAGATG
CTCCCGGACA TTCCGCTGTT GCGCTACGAC GACGGACGCC TGCTGCCGCA GACGTTCCGC
GGCTTCGCCG TGGTTTCCCG CGAGCTGCCG GGCCTGGCCC TGCAGGCCGG ACGCTTCGAC
GCGGTGAGCC TGCGCAATTC GGCGGACATG CAGGACCTGT CGGCCTGGAG CGCGCCGACG
CAGGAGTCGG ACGGTTTCAA CTACGCCGGC GCCGAATACC GCTTCAACCG CGAGCGCACC
CAACTGGGCC TGTGGCACGG GCAACTGGAG GACATCTACC GGCAGAACTA CGCCAACCTG
CTGCACAAGC AGCGTGTCGG CGACTGGACC CTGGGCGCCA ACCTCGGCCT GTTCGTCGAC
CGCGACGACG GCGCCGCGCG CGCCGGCGAG ATCGACAGCC ATACCGTCTA CGGCCTATTT
TCTGCCGGCA TCGGCCTGCA CACCTTCTAC CTTGGCCTGC AGAAGGTCGG CGGCGACAGC
GGCTGGCAGT CGGTCTACGG CAGCAGTGGG CGGAGCATGG GCAACGACAT GTTCAACGGC
AACTTCACCA ACGCCGACGA ACGCTCCTGG CAGGTTCGCT ACGACTACGA TTTCGTCGGC
CTCGGCTGGC CCGGCCTGAT CGGTATGGTC CGCTACGGCC ATGGCTCGAA CGCCACCACC
AAGGCCGGTA GCGGCGGTAA GGAATGGGAG CGCGATGTCG AGCTCGGCTA CACCGTGCAG
AGCGGTCCGC TGGCGCGGCT CAACGTGCGC CTCAACCACG CCAGCAACCG ACGCAGCTTC
AACAGCGACT TCGACCAGAC GCGGCTGGTG GTGAGTTACC CGTTGTCGTG GTGA
|
|---|
| Protein sequence | MKIRRKTAIP RNAGAVLPML ACLAAQAAEG GFLQDAKTDL VLRNYYFNRD FRDHDAGKSL
VDEWAQGFIL KFSSGYTPGT VGVGLDAIGL FGVKLNSGRG TSNSELLPLH DDGRAADDYG
RVGVAAKLRV SASELKIGEM LPDIPLLRYD DGRLLPQTFR GFAVVSRELP GLALQAGRFD
AVSLRNSADM QDLSAWSAPT QESDGFNYAG AEYRFNRERT QLGLWHGQLE DIYRQNYANL
LHKQRVGDWT LGANLGLFVD RDDGAARAGE IDSHTVYGLF SAGIGLHTFY LGLQKVGGDS
GWQSVYGSSG RSMGNDMFNG NFTNADERSW QVRYDYDFVG LGWPGLIGMV RYGHGSNATT
KAGSGGKEWE RDVELGYTVQ SGPLARLNVR LNHASNRRSF NSDFDQTRLV VSYPLSW
|
|---|
| |