Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_64570 |
Symbol | irlR |
ID | 4384866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5751808 |
End bp | 5752497 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639327815 |
Product | two-component response regulator |
Protein accession | YP_793353 |
Protein GI | 116053034 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATCC TGGTGATCGA AGACGATACG AAGACCGGCG AGTACCTGAA GAAGGGCCTC GGCGAGTCGG GCTATGCGGT CGACTGGTCG CAGCACGGCG CCGACGGTCT CTACCTGGCG CTGGAGAACC GCTACGACCT GGTGGTCCTC GACGTGATGC TGCCCGGCCT GGACGGTTGG CAGATCATGG AAGTGCTGCG CAAGAAGCAC GATGTGCCGG TGCTCTTCCT CACCGCCCGC GACCAGTTGC AAGACCGTAT CCGCGGCCTC GAACTGGGTG CCGACGACTA CCTGGTGAAA CCCTTCTCCT TCACCGAGTT GCTGCTGCGT ATCCGTACCC TGCTGCGCCG CGGCGTGGTC CGCGAGGCAG AGCAGGTGCA ACTGGCCGAT CTGCACCTGG ACGTGCTGCG GCGCAAGGTC AGCCGCCAGG GGCAGGTGAT CGCCCTGACC AACAAGGAGT TCGCCCTCCT GCACCTGCTG ATGCGCCGCG AGGGCGAGGT GCTGTCGCGC ACCCTGATCG CCTCGGAGGT CTGGGACATG AACTTCGACA GCGACACCAA CGTCGTCGAC GTGGCGATCA AGCGCCTGCG CGCCAAGGTC GACAATCCCT TCCCGAACAA GCTGATCCAT ACCGTGCGCG GCATCGGCTA CGTCTGCGAG GAGCGCCCGT GCCCGCCCGC CGCTCCCTGA
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Protein sequence | MRILVIEDDT KTGEYLKKGL GESGYAVDWS QHGADGLYLA LENRYDLVVL DVMLPGLDGW QIMEVLRKKH DVPVLFLTAR DQLQDRIRGL ELGADDYLVK PFSFTELLLR IRTLLRRGVV REAEQVQLAD LHLDVLRRKV SRQGQVIALT NKEFALLHLL MRREGEVLSR TLIASEVWDM NFDSDTNVVD VAIKRLRAKV DNPFPNKLIH TVRGIGYVCE ERPCPPAAP
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