| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_64200 |
|---|
| Symbol | purH |
|---|
| ID | 4383323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 5719711 |
|---|
| End bp | 5721318 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639327782 |
|---|
| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| Protein accession | YP_793320 |
|---|
| Protein GI | 116053002 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
|---|
| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.195838 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC AAACCACCCG CCTGCCCATC CGCCGCGCGC TGATCAGCGT TTCCGACAAG
ACCGGCGTCG TCGACTTCGC CCGTGAGCTG GTCGCCCTCG GCGTGGAAAT CCTTTCCACC
GGCGGCACCT ACAAGCTGCT CCGGGACAAC GGCATCTCTG CCGTGGAAGT GGCCGACTAC
ACCGGCTTCC CGGAAATGAT GGACGGTCGG GTGAAGACCC TGCACCCGAA GGTGCATGGC
GGTATCCTCG GTCGCCGCGA CCTCGACGGC GCGGTCATGG AGCAGCACGG CATCAAGCCG
ATCGACCTGG TGGCGGTCAA CCTGTATCCC TTCGAGGCCA CGGTGGTCAG GCCCGACTGC
GACCTGCCTA CCGCCATCGA GAACATCGAT ATCGGCGGGC CGACCATGGT CCGTTCGGCG
GCGAAGAACC ACAAGGATGT CGCCATCGTG GTCAATGCCG GCGACTACGC CGCCGTGATC
GAATCCCTCA AGGCCGGCGG CCTGACCTAC GCCCAGCGTT TCGACCTGGC CCTCAAGGCG
TTCGAGCACA CCTCCGCCTA CGACGGCATG ATCGCCAACT ACCTGGGTAC CATCGACCAG
ACCCGCGACA CCCTCGGCAC CGCCGACCGC GGCGCCTTCC CGCGCACCTT CAACAGCCAG
TTCGTCAAGG CCCAGGAAAT GCGCTACGGC GAGAACCCGC ACCAGAGCGC GGCGTTCTAC
GTCGAGGCGA AGAAGGGCGA GGCCAGCGTC TCCACCGCCA TCCAGTTGCA AGGCAAGGAG
TTGTCGTTCA ACAACGTCGC CGACACCGAC GCCGCCCTGG AATGCGTGAA GAGCTTCCTC
AAGCCGGCCT GCGTGATCGT CAAGCATGCC AACCCCTGCG GCGTCGCCGT GGTGCCGGAA
GACGAAGGCG GCATCCGCAA GGCCTACGAC CTGGCCTACG CCACCGATAG CGAATCGGCG
TTCGGCGGCA TCATCGCCTT CAACCGCGAG CTGGACGGCG AAACCGCCAA GGCCATCGTC
GAGCGCCAGT TCGTCGAGGT GATCATCGCG CCGAAGATTT CCGCCGCCGC CCGCGAGGTG
GTCGCCGCCA AGGCCAACGT ACGCCTGCTC GAATGCGGCG AATGGCCAGC CGAGCGCGCC
CCGGGCTGGG ACTTCAAGCG GGTCAACGGC GGCCTGCTGG TACAGAGCCG CGACATCGGC
ATGATCAAGG CCGAGGACCT GAAGATCGTC ACTCGCCGCG CACCCACCGA GCAGGAGATC
CACGACCTGA TCTTCGCCTG GAAGGTGGCC AAGTTCGTCA AGTCCAACGC CATCGTCTAC
GCCAGGAACC GCCAGACCGT CGGCGTCGGC GCCGGCCAGA TGAGCCGGGT CAACTCCGCA
CGGATCGCCG CGATCAAGGC CGAGCACGCC GGCCTGGAAG TGAAAGGCGC GGTGATGGCC
TCGGACGCCT TCTTCCCGTT CCGCGACGGC ATCGACAACG CGGCCAAGGC CGGCATCACC
GCGGTGATCC AGCCGGGCGG CTCGATGCGC GACAGCGAAG TGATCGCGGC GGCCGACGAG
GCGGATATCG CGATGGTGTT CACTGGCATG CGCCATTTCC GCCATTGA
|
|---|
| Protein sequence | MTDQTTRLPI RRALISVSDK TGVVDFAREL VALGVEILST GGTYKLLRDN GISAVEVADY
TGFPEMMDGR VKTLHPKVHG GILGRRDLDG AVMEQHGIKP IDLVAVNLYP FEATVVRPDC
DLPTAIENID IGGPTMVRSA AKNHKDVAIV VNAGDYAAVI ESLKAGGLTY AQRFDLALKA
FEHTSAYDGM IANYLGTIDQ TRDTLGTADR GAFPRTFNSQ FVKAQEMRYG ENPHQSAAFY
VEAKKGEASV STAIQLQGKE LSFNNVADTD AALECVKSFL KPACVIVKHA NPCGVAVVPE
DEGGIRKAYD LAYATDSESA FGGIIAFNRE LDGETAKAIV ERQFVEVIIA PKISAAAREV
VAAKANVRLL ECGEWPAERA PGWDFKRVNG GLLVQSRDIG MIKAEDLKIV TRRAPTEQEI
HDLIFAWKVA KFVKSNAIVY ARNRQTVGVG AGQMSRVNSA RIAAIKAEHA GLEVKGAVMA
SDAFFPFRDG IDNAAKAGIT AVIQPGGSMR DSEVIAAADE ADIAMVFTGM RHFRH
|
|---|
| |