Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_62200 |
Symbol | mrcB |
ID | 4384639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5549900 |
End bp | 5552224 |
Gene Length | 2325 bp |
Protein Length | 774 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639327622 |
Product | penicillin-binding protein 1B |
Protein accession | YP_793163 |
Protein GI | 116052846 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.379753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGTC CCCGATCCCC CCGTTCCCGT AACAGCAAAG CACGCCCGGC ACCCGGCCTG AACAAATGGC TCGGCTGGGC CCTCAAGCTC GGCCTCGTCG GCCTGGTGCT CCTCGCCGGC TTCGCCATCT ATCTCGATGC CGTGGTGCAG GAGAAATTCT CCGGCCGGCG CTGGACCATC CCGGCGAAGG TCTATGCCCG CCCGCTGGAG CTGTTCAACG GCCTGAAGCT GAGCAGGGAA GACTTCCTGC GCGAACTCGA CGCCCTCGGC TACCGTCGCG AGCCCAGCGT GAGCGGCCCT GGAACCGTGT CGGTGGCGGC CAGCGCGGTC GAACTCAATA CCCGTGGCTT CCAGTTCTAC GAAGGCGCGG AACCGGCCCA GCGCGTGCGC GTGCGCTTCA ACGGCAACTA CGTCAGCGGG CTGAGCCAGG CCAACGGCAA GGAACTGGCG GTGGCGCGCC TTGAGCCGCT GCTGATCGGC GGCTTGTATC CGGCGCACCA TGAGGATCGC ATCCTGGTCA AGCTCGACCA GGTGCCGACC TACCTGATCG ACACCCTGGT CGCGGTCGAG GATCGCGACT TCTGGAACCA CCATGGCGTG TCGCTGAAGT CCGTGGCCCG GGCGGTGTGG GTCAACACCA CGGCCGGCCA GCTGCGCCAG GGCGGCAGCA CCCTGACCCA GCAGTTGGTG AAGAACTTCT TCCTGAGCAA CGAACGCAGC CTGAGCCGCA AGATCAACGA AGCGATGATG GCGGTGCTGC TGGAGCTGCA CTACGACAAG CGCGACATCC TCGAGTCCTA TCTCAACGAG GTGTTCCTCG GCCAGGATGG GCAACGAGCG ATCCATGGCT TCGGCCTGGC CAGCCAGTAT TTCTTCAGCC AGCCGCTGGC CGAGCTCAAG CTCGACCAGG TGGCGCTGCT GGTCGGCATG GTCAAGGGAC CGTCCTACTT CAACCCGCGG CGTTACCCGG ATCGTGCGCT GGCGCGGCGC AACCTGGTGC TCGATGTGCT CGCCGAGCAG GGCGTGGCGA CCCAGCAGGA AGTCGACGCC GCCAAGCAGC GCCCGCTCGG CGTGACCCGG CAGGGCAGCA TGGCCGACAG CTCCTATCCG GCCTTCCTCG ACCTGGTCAA GCGCCAGTTG CGCCAGGACT ACCGCGACGA GGACCTGACC GAGGAAGGGC TGCGCATCTT CACCAGCTTC GATCCGATCC TGCAGGAGAA GGCCGAGACC TCCGTCAACG AAACGCTCAA GCGCCTCAGT GGGCGCAAGG GAGTCGACCA GGTCGAGGCG GCGATGGTCG TGACCAATCC GGAAACCGGC GAGATCCAGG CCCTGATCGG CAGTCGCGAC CCGCGCTTCG CCGGCTTCAA CCGGGCCCTG GACGCGGTGC GGCCGATCGG TTCGCTGATC AAGCCGGCGG TCTACCTGAC CGCACTCGAG CGGCCGAGCA AGTACACCCT GACCACCTGG GTGCAGGACG AACCCTTCGC GGTGAAAGGC CAGGACGGCC AGGTCTGGCG ACCGCAGAAC TACGACCGGC GCTCGCATGG CACGATCTTC CTGTACCAGG GCCTGGCAAA CTCCTACAAC CTGTCCACCG CCAAGCTCGG CCTCGACGTC GGTGTGCCCA ACGTGCTGCA GACCGTCGCC CGGCTGGGCA TCAACCGTGA CTGGCCAGCC TATCCGTCGA TGCTGCTGGG CGCCGGTTCG CTCAGTCCGA TGGAGGTCGC CACCATGTAC CAGACCATCG CCAGCGGCGG CTTCAACACG CCGTTGCGGG GGATCCGCAG CGTCCTCACT GCCGACGGCC AGCCGCTCAA GCGCTATCCG TTCCAGGTCG AACAGCGCTT CGACTCGGGC GCCGTCTACC TGGTGCAGAA CGCCATGCAG CGGGTCATGC GCGAAGGCAC CGGGCGGTCG GTGTACAGTC AATTGCCGTC GTCGCTGACC CTCGCCGGCA AGACCGGCAC CAGCAACGAC TCGCGCGATA GCTGGTTCTC CGGTTTCGGC GGCGACCTCC AGGCTGTGGT CTGGCTCGGT CGCGACGACA ACGGCAAGAC GCCGCTTACC GGCGCCACCG GTGCCTTGCA GGTGTGGGCC AGCTTCATGC GCAAGGCGCA TCCGCAATCG CTGGAAATGC CGATGCCGGA GAACGTGGTG ATGGCCTGGG TCGACGCGCA GACCGGGCAG GGCTCGGCGG CGGATTGCCC GAATGCCGTA CAGATGCCCT ATATTCGTGG CAGCGAGCCC GCCCAGGGCC CAGGCTGCGG GAGCCAGAAC CCCGCCGGCG AGGTGATGGA CTGGGTACGA GGCTGGCTGA ATTGA
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Protein sequence | MTRPRSPRSR NSKARPAPGL NKWLGWALKL GLVGLVLLAG FAIYLDAVVQ EKFSGRRWTI PAKVYARPLE LFNGLKLSRE DFLRELDALG YRREPSVSGP GTVSVAASAV ELNTRGFQFY EGAEPAQRVR VRFNGNYVSG LSQANGKELA VARLEPLLIG GLYPAHHEDR ILVKLDQVPT YLIDTLVAVE DRDFWNHHGV SLKSVARAVW VNTTAGQLRQ GGSTLTQQLV KNFFLSNERS LSRKINEAMM AVLLELHYDK RDILESYLNE VFLGQDGQRA IHGFGLASQY FFSQPLAELK LDQVALLVGM VKGPSYFNPR RYPDRALARR NLVLDVLAEQ GVATQQEVDA AKQRPLGVTR QGSMADSSYP AFLDLVKRQL RQDYRDEDLT EEGLRIFTSF DPILQEKAET SVNETLKRLS GRKGVDQVEA AMVVTNPETG EIQALIGSRD PRFAGFNRAL DAVRPIGSLI KPAVYLTALE RPSKYTLTTW VQDEPFAVKG QDGQVWRPQN YDRRSHGTIF LYQGLANSYN LSTAKLGLDV GVPNVLQTVA RLGINRDWPA YPSMLLGAGS LSPMEVATMY QTIASGGFNT PLRGIRSVLT ADGQPLKRYP FQVEQRFDSG AVYLVQNAMQ RVMREGTGRS VYSQLPSSLT LAGKTGTSND SRDSWFSGFG GDLQAVVWLG RDDNGKTPLT GATGALQVWA SFMRKAHPQS LEMPMPENVV MAWVDAQTGQ GSAADCPNAV QMPYIRGSEP AQGPGCGSQN PAGEVMDWVR GWLN
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