Gene PA14_61750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_61750 
Symbolipk 
ID4385667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5509336 
End bp5510184 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content61% 
IMG OID639327583 
Product4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 
Protein accessionYP_793131 
Protein GI116052814 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.907869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0041484 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGTGC GCCTCAGCCT GCCAGCCCCG GCCAAGCTCA ATCTGTTCCT GCATATCCTA 
GGCCGCCGCG ACGATGGCTA TCACGAGTTG CAGACCCTGT TCCAATTCCT CGACCACGGC
GACGAGCTGC ATTTCGAAGC CCGCCAGGAC GGCCAGGTAC GCCTGCACAC GGAAATCGCC
GGGGTGCCGC ACGACAGCAA CCTGATCGTG CGCGCCGCGC GCGGGCTGCA GGAAGCCTCC
GGCAGCCTGC AAGGCGTCGA CATCTGGCTG GACAAGCGCT TGCCCATGGG GGGCGGCATC
GGCGGCGGCA GCTCCGACGC CGCCACGACG CTCCTGGCCT TGAACCATCT CTGGCAACTC
GGCTGGGACG AGGACCGCAT CGCCGCCCTG GGCCTGCGCC TGGGCGCCGA CGTGCCGGTC
TTCACCCGCG GACGCGCGGC TTTCGCCGAG GGCGTGGGCG AAAAGCTCAC CCCGGTGGAC
ATCCCGGAGC TCTGGTATCT CGTCTTGGTT CCGCAAGTAC TTGTCAGCAC AGCAGAAATT
TTTTCAGATC CACTGTTGAC ACGCGATTCT CCCGCCATTA AAGTGCGCAC CGTTCTCGAG
GGGGACAGCC GAAACGACTG TCAGCCGGTA GTCGAGAGGC GTTACCCAGA AGTTCGTAAC
GCTTTGATCT TGCTAAACAA ATTTGTTTCA GCTAGATTAA CCGGCACTGG AGGTTGTGTG
TTTGGGAGCT TCCCAAACAA AGCTGAAGCT GATAAAGTCT CGGCCCTTCT TCCAGACCAC
CTTCAGAGGT TCGTCGCCAA AGGAAGCAAC GTCTCGATGT TGCACCGGAA GCTGGAAACT
CTGGTCTGA
 
Protein sequence
MSVRLSLPAP AKLNLFLHIL GRRDDGYHEL QTLFQFLDHG DELHFEARQD GQVRLHTEIA 
GVPHDSNLIV RAARGLQEAS GSLQGVDIWL DKRLPMGGGI GGGSSDAATT LLALNHLWQL
GWDEDRIAAL GLRLGADVPV FTRGRAAFAE GVGEKLTPVD IPELWYLVLV PQVLVSTAEI
FSDPLLTRDS PAIKVRTVLE GDSRNDCQPV VERRYPEVRN ALILLNKFVS ARLTGTGGCV
FGSFPNKAEA DKVSALLPDH LQRFVAKGSN VSMLHRKLET LV