Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_61750 |
Symbol | ipk |
ID | 4385667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5509336 |
End bp | 5510184 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639327583 |
Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
Protein accession | YP_793131 |
Protein GI | 116052814 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.907869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0041484 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGTGC GCCTCAGCCT GCCAGCCCCG GCCAAGCTCA ATCTGTTCCT GCATATCCTA GGCCGCCGCG ACGATGGCTA TCACGAGTTG CAGACCCTGT TCCAATTCCT CGACCACGGC GACGAGCTGC ATTTCGAAGC CCGCCAGGAC GGCCAGGTAC GCCTGCACAC GGAAATCGCC GGGGTGCCGC ACGACAGCAA CCTGATCGTG CGCGCCGCGC GCGGGCTGCA GGAAGCCTCC GGCAGCCTGC AAGGCGTCGA CATCTGGCTG GACAAGCGCT TGCCCATGGG GGGCGGCATC GGCGGCGGCA GCTCCGACGC CGCCACGACG CTCCTGGCCT TGAACCATCT CTGGCAACTC GGCTGGGACG AGGACCGCAT CGCCGCCCTG GGCCTGCGCC TGGGCGCCGA CGTGCCGGTC TTCACCCGCG GACGCGCGGC TTTCGCCGAG GGCGTGGGCG AAAAGCTCAC CCCGGTGGAC ATCCCGGAGC TCTGGTATCT CGTCTTGGTT CCGCAAGTAC TTGTCAGCAC AGCAGAAATT TTTTCAGATC CACTGTTGAC ACGCGATTCT CCCGCCATTA AAGTGCGCAC CGTTCTCGAG GGGGACAGCC GAAACGACTG TCAGCCGGTA GTCGAGAGGC GTTACCCAGA AGTTCGTAAC GCTTTGATCT TGCTAAACAA ATTTGTTTCA GCTAGATTAA CCGGCACTGG AGGTTGTGTG TTTGGGAGCT TCCCAAACAA AGCTGAAGCT GATAAAGTCT CGGCCCTTCT TCCAGACCAC CTTCAGAGGT TCGTCGCCAA AGGAAGCAAC GTCTCGATGT TGCACCGGAA GCTGGAAACT CTGGTCTGA
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Protein sequence | MSVRLSLPAP AKLNLFLHIL GRRDDGYHEL QTLFQFLDHG DELHFEARQD GQVRLHTEIA GVPHDSNLIV RAARGLQEAS GSLQGVDIWL DKRLPMGGGI GGGSSDAATT LLALNHLWQL GWDEDRIAAL GLRLGADVPV FTRGRAAFAE GVGEKLTPVD IPELWYLVLV PQVLVSTAEI FSDPLLTRDS PAIKVRTVLE GDSRNDCQPV VERRYPEVRN ALILLNKFVS ARLTGTGGCV FGSFPNKAEA DKVSALLPDH LQRFVAKGSN VSMLHRKLET LV
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