| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_61540 |
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| Symbol | |
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| ID | 4385630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 5489509 |
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| End bp | 5491881 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639327566 |
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| Product | hypothetical protein |
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| Protein accession | YP_793114 |
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| Protein GI | 116052797 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.675454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.215257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTCGCC CGTGTCAGCG GCGCTCCCGC CACCACCGCT CGCTACTGAT CGGCCTGGCG
CTGCTCTCCC CTGTCCATGC GGCGGACTAC CTGGCCGGAC TGCCGCCGCC GCAACCCGCT
CCGTCCGGCG GCGGCAACGT CCTCTACTAC CTGGAACTGG TGATCAACGG CCGCGACAGC
GGCCAGGTGG TGCCGGTCAA CGCCGCCGAT GGCCATTACC TGCTCGACGC CGCGGCCCTG
CGCGAAGCCG GCGTGCGCCT GCCTGGCAAC CCCGCCGGAC AGGTCGCGGT GGACGCCCTG
CCCGAGGTCC GGGCGGACTA TGACAGCGCC AGCCAGCAAC TGCACCTGCA AGTGCCGCCG
GACTGGCTGC CGGAGCAGCG CTTCGACGAT CCCGGACTGG TCGCCCGCGC CCCGGCGCGC
AGCAGCCTCG GCGCGCTGTT CAACTACGAC CTGTACTACT CGGCCCCCGC CGACGGCGCC
ACACCCTGGC TTTCCGCGCT GCTCGAGCAA CGTCTGTTCG ACGGCTTCGG GGTGATCTCC
AACACCGGCG TCTACACCCG CTATTTCGGC GACGCCGACA ACCTCGACAG CCGCTACCTG
CGCTATGACA CCTACTGGCT GTACAACGAC GAACGCAACA TGCACAGCTA CCAACTGGGC
GACTACGTCA ACGGCGCGCT GAACTGGACC ACCCCGGTAC GCATGGGCGG CTTTCGCTTC
GCCCGCAACT TCGGCGTACG TCCGGACCTG GTCACCTATC CGCTGCTGCG CTTCGACGGC
CAGGCCGCCG TACCCAGCAC CGTCGACCTG TTCATCAACG GCTACAAGGC CAGCAGCGCC
GACCTGCAGC CCGGTCCCTT CGCCATCAGC AACGTGCCGT ATATCAACGG AGCCGGCGAA
GCCACGGTGG TGACCACCGA CGCCCAGGGC CGACAAGTGG TGACCAGCCT GCCGTTCTAC
GTATCCAACA CCCTGCTGGC GCGCGGCCTG AGCGATTTCG ACCTGTCCGT CGGGCGTCTG
CGCGACGACT ACGGCCTGCG CAACTTCTCC TATGCCGACA ATGCCGCCAG CGGCATCTAC
CGCTACGGCG TCAGCGACCG CCTGACCCTC TCCACCCACG CCGAGGCCGC CAGCGACCTG
CGCCTGCTCG GCATCGGCGG CGACATCGCC GTGGCCACCT TCGGCACCCT CAGCCTGGCG
GCCAGCGGCA GCGACGGCCA GGGCGACAGC GGCCAGCAAT ACCTGCTCGG CTACTCCTAC
TATTCGCGAC GGCTCGGCCT CAGCCTGCAA CACATCGAGC GCAGCGCCGG TTATGGCGAC
CTCGGCACCC TGGACGGCGA GTACCAGTTG AGCCGGCGCA CCGACCAGGC TACCGCCAGC
CTGACCTTCG ACGAGCAGGG CACCATCGGT GCCGGCTACT TCGACATCCG CGCCCGCGAC
GGCAGCCGCA CGCGCCTGGC CAACCTCTCT TACAGCCGCC CGATCGGCAG CCGTAGCAGC
TTCTACCTGG CGCTGAACAA GGATCTCGAC GGCGACGGCT ACAGCGCGCT GATGCAACTG
GTGATTCCCT TCGACATCAA CGGCCTGCTG AACATCGGCG TCACCCGCGA CAGCGACCGG
CGCTACAGCG AGCGGGTGAT CTGGAGCCGC TCCACGCCGA GCCAGGGCGG TCTCGGCTGG
AACCTCGGCT ATGGCGGCGG CGCCAGCCGC TACCAGCAGG CCGACCTGAC CTGGCGCATG
CAGAACGTGC AACTGCAGGG CGGCCTCTAT GGCGAGACCG GCAACTACAC GCGCTGGGCC
GATCTCAGCG GCTCGCTGGT ATGGATGGAC AACGCCGTGT TCGCCAGCAA CCGGATCAAC
GACGCCTTCG TCCTGGTCAG CACCAAGGGT TATCCACAGG TGCCGATCCG CTACGAGAAC
CAACTGATGG GCAGCACCGA CGACAACGGC CACCTGCTGG TGCCCTGGGT CGCGGCCTAC
TACCCGGCGA AGTTCCAGAT CGAGCCGCTG GACCTTCCGG CCAACGTCAG CGCGCCCGAA
GTCGAGCAGC GCGTGGCGGT ACGCCAGGGC AGCGGCCTGC TGCTGGATTT CCCGATCCGT
GCCGTGGTCG CCGCCAGCAT CAGCCTGGTG GACGAGCGCG GCGAACCGCT GCCGCTGGGT
AGCCGGGCCG AAGAAACCGG CAGCGGCCAG CGCGCCAGCG TCGGCTGGGA CGGCCAGGTC
TATTTCGAAG GATTGCAAAG CGACAACCAG CTACGCGTGG TCCGCCCCGA CGGCCGGGCC
TGCCAGGCAC GCTTCCGCCT GGACACGCGC AAACCCACCG TCAGCCAGGT CGGCCCGCTG
ACCTGCTCGG CCCCCATCGG AGATACGCCA TGA
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| Protein sequence | MPRPCQRRSR HHRSLLIGLA LLSPVHAADY LAGLPPPQPA PSGGGNVLYY LELVINGRDS
GQVVPVNAAD GHYLLDAAAL REAGVRLPGN PAGQVAVDAL PEVRADYDSA SQQLHLQVPP
DWLPEQRFDD PGLVARAPAR SSLGALFNYD LYYSAPADGA TPWLSALLEQ RLFDGFGVIS
NTGVYTRYFG DADNLDSRYL RYDTYWLYND ERNMHSYQLG DYVNGALNWT TPVRMGGFRF
ARNFGVRPDL VTYPLLRFDG QAAVPSTVDL FINGYKASSA DLQPGPFAIS NVPYINGAGE
ATVVTTDAQG RQVVTSLPFY VSNTLLARGL SDFDLSVGRL RDDYGLRNFS YADNAASGIY
RYGVSDRLTL STHAEAASDL RLLGIGGDIA VATFGTLSLA ASGSDGQGDS GQQYLLGYSY
YSRRLGLSLQ HIERSAGYGD LGTLDGEYQL SRRTDQATAS LTFDEQGTIG AGYFDIRARD
GSRTRLANLS YSRPIGSRSS FYLALNKDLD GDGYSALMQL VIPFDINGLL NIGVTRDSDR
RYSERVIWSR STPSQGGLGW NLGYGGGASR YQQADLTWRM QNVQLQGGLY GETGNYTRWA
DLSGSLVWMD NAVFASNRIN DAFVLVSTKG YPQVPIRYEN QLMGSTDDNG HLLVPWVAAY
YPAKFQIEPL DLPANVSAPE VEQRVAVRQG SGLLLDFPIR AVVAASISLV DERGEPLPLG
SRAEETGSGQ RASVGWDGQV YFEGLQSDNQ LRVVRPDGRA CQARFRLDTR KPTVSQVGPL
TCSAPIGDTP
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