Gene PA14_61530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_61530 
Symbol 
ID4385629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5488704 
End bp5489492 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content70% 
IMG OID639327565 
Productputative pili assembly chaperone 
Protein accessionYP_793113 
Protein GI116052796 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3121] P pilus assembly protein, chaperone PapD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.118155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.223638 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGTC CACACCTACC TCTCCGCCCC GGCCGCTGGC TTGCGGCGCT GCTGGCGCTG 
TTCCTGGGCG GCCCGACACA AGCCGCCAGT GCGGTGCTGA TCTGGCCGAT CAACCCGGCC
ATCGAAGCCG ACCAACCGGC CACGGCGCTG TGGCTGGAGA ATCGCGGCAA GCAACCGGTG
GTCCTGCAGG TGCGCGTGCT CGGCTGGTCC CAGGCGGATT TCCAGGACGT CTATCGCAAC
CAGCAGGCAG TGATTCCCAG CCCGCCCTTC GTCAAGGTCG AGCCGGGCCG CCGACAACTG
GTCCGGCTGA TCCGCCAGGG CGGCCAGCCC AGCACGCCGG AGGACGCCTA TCGGGTGCTG
ATCGACGAAG TGCCCGACGG CAGCGCGGGG CAGACGCAAC GAAGCCCCGG TCTCGCCCTG
CAGTTCCAGA TGCGCTATTC GGTGCCGCTG TTCGTCAGCG CCGACGGCGT CTGGACCCAG
CCCCGCAGCG ATGTCGAGCG CGACCCGGCC GACGCGACCC GGCCGAAGCT GGCCTGGCGG
CTGGTCGAGG AACAGGGCAA GCGTTACCTG CAGGTGCGCA ACGAGGGTAG CGTGCACGCC
CGCCTGAGCC ATGTCCGCTG GGAGGGCAAC GGCCGCAGCC TGGCGCTGCT GGACGGCCTG
CTCGGCTACG TGCTGCCCGG CCAGCAGATG CGCTGGCCGC TGCCGCCGGG GCTGCTGCCG
GACGCCGGCA TGACCCTGAA ACTGCAACTG GCGGACAACG ACGCGCCGAT CAGCGTTCCC
GGCTACTGA
 
Protein sequence
MSSPHLPLRP GRWLAALLAL FLGGPTQAAS AVLIWPINPA IEADQPATAL WLENRGKQPV 
VLQVRVLGWS QADFQDVYRN QQAVIPSPPF VKVEPGRRQL VRLIRQGGQP STPEDAYRVL
IDEVPDGSAG QTQRSPGLAL QFQMRYSVPL FVSADGVWTQ PRSDVERDPA DATRPKLAWR
LVEEQGKRYL QVRNEGSVHA RLSHVRWEGN GRSLALLDGL LGYVLPGQQM RWPLPPGLLP
DAGMTLKLQL ADNDAPISVP GY