Gene PA14_60820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_60820 
SymboloprJ 
ID4384571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5422102 
End bp5423541 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content70% 
IMG OID639327508 
Productouter membrane protein OprJ 
Protein accessionYP_793056 
Protein GI116052739 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAC CTGCATTCGG CGTATCGGCG TTGCTGATCG CCCTGACCCT CGGCGCCTGC 
TCCATGGCGC CGACCTACGA ACGTCCCGCC GCGCCGGTGG CCGACAGCTG GAGCGGCGCC
GCCGCCCAGC GCCAGGGCGC GGCGATCGAC ACGCTGGACT GGAAGAGTTT CATCGTCGAT
GCCGAACTAC GCCGCCTGGT GGGCGTGGCC CTGGATAACA ACCGCTCGCT GCGCCAGACC
CTCCTGGATA TCGAGGCGGC CCGCGCGCAG TACCGCATCC AGCGCGCCGA CCGGGTTCCG
GGCCTGAATG CCGCTGCCAC CGGCAACCGC CAGCGGCAGC CGGCCGACCT GTCCGCCGGC
AATCGCTCGG AAGTGGCCAG CAGCTACCAG GTCGGGCTGG CCCTGCCGGA GTACGAACTG
GACCTCTTCG GTCGGGTCAA GAGCCTGACC GACGCAGCCC TGCAACAGTA CCTGGCCAGC
GAGGAGGCAG CGCGCGCGGC ACGGATCGCC CTGGTCGCCG AGGTCAGCCA GGCCTACCTG
AGCTACGACG GCGCCCTGCG GCGCCTGGCG CTGACCCGTC AGACCCTGGT CAGCCGCGAG
TATTCCTTCG CCCTGATCGA CCAGCGCCGC GCGGCCGGCG CCGCCACCGC GCTGGACTAC
CAGGAAGCCC TTGGCCTGGT GGAGCAGGCG CGCGCCGAGC AGGAGCGCAA CCTGCGGCAG
AAACAGCAGG CATTCAACGC GCTGGTGTTG CTGCTGGGCA GCGACGATGC CGCGCAGGCG
ATTCCGCGGA GTCCGGGGCA GCGGCCGAAG CTGTTGCAGG ACATCGCTCC CGGCACGCCG
TCCGAGCTGA TCGAGCGACG CCCCGACATC CTTGCCGCCG AACATCGTTT GCGGGCGCGC
AACGCGGATA TCGGCGCGGC GCGCGCGGCG TTCTTCCCAC GCATCAGCCT GACCGGCAGC
TTCGGCACCT CCAGCGCGGA AATGTCCGGC CTGTTCGATG GCGGCTCGCG CTCCTGGAGC
TTCCTGCCGA CGCTGACGCT GCCGATCTTC GATGGCGGGC GCAACCGTGC CAACCTGAGC
CTGGCCGAGG CGCGCAAAGA TTCGGCGGTG GCCGCCTACG AGGGGACCAT CCAGACCGCT
TTCCGCGAGG TCGCCGACGC CCTGGCGGCC AGTGATACCC TGCGTCGCGA AGAGAAGGCC
CTGCGCGCCC TGGCGAACAG CAGCAACGAA GCCCTGAAGC TGGCCAAGGC ACGCTACGAG
AGTGGCGTCG ACAACCACCT GCGCTACCTC GATGCGCAGC GCAGCAGCTT CCTCAACGAG
ATCGCCTTCA TCGACGGCAG CACCCAGCGG CAGATCGCCC TGGTCGACCT GTTCCGCGCG
CTCGGCGGAG GCTGGGACGA GGGACGGAGC CTGGTGGTAC ATCGAGGCGG CAGGAGTTGA
 
Protein sequence
MRKPAFGVSA LLIALTLGAC SMAPTYERPA APVADSWSGA AAQRQGAAID TLDWKSFIVD 
AELRRLVGVA LDNNRSLRQT LLDIEAARAQ YRIQRADRVP GLNAAATGNR QRQPADLSAG
NRSEVASSYQ VGLALPEYEL DLFGRVKSLT DAALQQYLAS EEAARAARIA LVAEVSQAYL
SYDGALRRLA LTRQTLVSRE YSFALIDQRR AAGAATALDY QEALGLVEQA RAEQERNLRQ
KQQAFNALVL LLGSDDAAQA IPRSPGQRPK LLQDIAPGTP SELIERRPDI LAAEHRLRAR
NADIGAARAA FFPRISLTGS FGTSSAEMSG LFDGGSRSWS FLPTLTLPIF DGGRNRANLS
LAEARKDSAV AAYEGTIQTA FREVADALAA SDTLRREEKA LRALANSSNE ALKLAKARYE
SGVDNHLRYL DAQRSSFLNE IAFIDGSTQR QIALVDLFRA LGGGWDEGRS LVVHRGGRS