Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_60820 |
Symbol | oprJ |
ID | 4384571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5422102 |
End bp | 5423541 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639327508 |
Product | outer membrane protein OprJ |
Protein accession | YP_793056 |
Protein GI | 116052739 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAAC CTGCATTCGG CGTATCGGCG TTGCTGATCG CCCTGACCCT CGGCGCCTGC TCCATGGCGC CGACCTACGA ACGTCCCGCC GCGCCGGTGG CCGACAGCTG GAGCGGCGCC GCCGCCCAGC GCCAGGGCGC GGCGATCGAC ACGCTGGACT GGAAGAGTTT CATCGTCGAT GCCGAACTAC GCCGCCTGGT GGGCGTGGCC CTGGATAACA ACCGCTCGCT GCGCCAGACC CTCCTGGATA TCGAGGCGGC CCGCGCGCAG TACCGCATCC AGCGCGCCGA CCGGGTTCCG GGCCTGAATG CCGCTGCCAC CGGCAACCGC CAGCGGCAGC CGGCCGACCT GTCCGCCGGC AATCGCTCGG AAGTGGCCAG CAGCTACCAG GTCGGGCTGG CCCTGCCGGA GTACGAACTG GACCTCTTCG GTCGGGTCAA GAGCCTGACC GACGCAGCCC TGCAACAGTA CCTGGCCAGC GAGGAGGCAG CGCGCGCGGC ACGGATCGCC CTGGTCGCCG AGGTCAGCCA GGCCTACCTG AGCTACGACG GCGCCCTGCG GCGCCTGGCG CTGACCCGTC AGACCCTGGT CAGCCGCGAG TATTCCTTCG CCCTGATCGA CCAGCGCCGC GCGGCCGGCG CCGCCACCGC GCTGGACTAC CAGGAAGCCC TTGGCCTGGT GGAGCAGGCG CGCGCCGAGC AGGAGCGCAA CCTGCGGCAG AAACAGCAGG CATTCAACGC GCTGGTGTTG CTGCTGGGCA GCGACGATGC CGCGCAGGCG ATTCCGCGGA GTCCGGGGCA GCGGCCGAAG CTGTTGCAGG ACATCGCTCC CGGCACGCCG TCCGAGCTGA TCGAGCGACG CCCCGACATC CTTGCCGCCG AACATCGTTT GCGGGCGCGC AACGCGGATA TCGGCGCGGC GCGCGCGGCG TTCTTCCCAC GCATCAGCCT GACCGGCAGC TTCGGCACCT CCAGCGCGGA AATGTCCGGC CTGTTCGATG GCGGCTCGCG CTCCTGGAGC TTCCTGCCGA CGCTGACGCT GCCGATCTTC GATGGCGGGC GCAACCGTGC CAACCTGAGC CTGGCCGAGG CGCGCAAAGA TTCGGCGGTG GCCGCCTACG AGGGGACCAT CCAGACCGCT TTCCGCGAGG TCGCCGACGC CCTGGCGGCC AGTGATACCC TGCGTCGCGA AGAGAAGGCC CTGCGCGCCC TGGCGAACAG CAGCAACGAA GCCCTGAAGC TGGCCAAGGC ACGCTACGAG AGTGGCGTCG ACAACCACCT GCGCTACCTC GATGCGCAGC GCAGCAGCTT CCTCAACGAG ATCGCCTTCA TCGACGGCAG CACCCAGCGG CAGATCGCCC TGGTCGACCT GTTCCGCGCG CTCGGCGGAG GCTGGGACGA GGGACGGAGC CTGGTGGTAC ATCGAGGCGG CAGGAGTTGA
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Protein sequence | MRKPAFGVSA LLIALTLGAC SMAPTYERPA APVADSWSGA AAQRQGAAID TLDWKSFIVD AELRRLVGVA LDNNRSLRQT LLDIEAARAQ YRIQRADRVP GLNAAATGNR QRQPADLSAG NRSEVASSYQ VGLALPEYEL DLFGRVKSLT DAALQQYLAS EEAARAARIA LVAEVSQAYL SYDGALRRLA LTRQTLVSRE YSFALIDQRR AAGAATALDY QEALGLVEQA RAEQERNLRQ KQQAFNALVL LLGSDDAAQA IPRSPGQRPK LLQDIAPGTP SELIERRPDI LAAEHRLRAR NADIGAARAA FFPRISLTGS FGTSSAEMSG LFDGGSRSWS FLPTLTLPIF DGGRNRANLS LAEARKDSAV AAYEGTIQTA FREVADALAA SDTLRREEKA LRALANSSNE ALKLAKARYE SGVDNHLRYL DAQRSSFLNE IAFIDGSTQR QIALVDLFRA LGGGWDEGRS LVVHRGGRS
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