Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_60790 |
Symbol | |
ID | 4384568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5418186 |
End bp | 5418872 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639327505 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_793053 |
Protein GI | 116052736 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 100 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCTCCC TGCAGGGGAT CGGCAAGGGC TACCTCCTGG GGGGGCAGCC GCTGCAGATA CTGAAAGACG TCTGCCTGGA CATCTTTCCC GGAGAAAGCT GCGCGATCGT CGGCGCGTCG GGCTCGGGCA AGAGCACCCT GCTGAATATT CTCGGCCTGC TCGACCGCCC GGACAGCGGC GCCTACCGCT TCGCCGAGCA CGACATCTTC AGCGTCGACG GGGACCGACT GGCGGCGATC CGCAACCGCC TGATCGGCTT CGTCTTCCAG AGCTTCAACC TGTTGCCGCG GCTGAACGCG CTGGACAACG TCGCGCTGCC CCTGAGCTAT CGAGGGATGC CGCGCCGCGA GGCACTGGAG CGGGCCGAGG CGATGCTCGC CCGGGTCGGC CTGGCCGAGC GCGCCGGCCA TCGTCCGGCG GACCTCTCCG GCGGCCAGCG GCAGCGCGTC GCCATCGCTC GCGCGCTGGT CGGCGAGCCG GCGCTGATCC TCGCCGACGA ACCAACCGGC AACCTCGACG CGAGCACCGC GAAAGAAGTG CTGGAGCTGC TCCTCACCCT CAACCGCGAG CGCCAGGTGA CCCTGGTGGT GGTCACCCAT GATCCCAGCC TGGCCGCCCG TCTCGGGCGC CAACTGACAG TGCGGCATGG CGAGGTGCAC GAGGACCTGG CGGAGGCCTG CCGGTGA
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Protein sequence | MISLQGIGKG YLLGGQPLQI LKDVCLDIFP GESCAIVGAS GSGKSTLLNI LGLLDRPDSG AYRFAEHDIF SVDGDRLAAI RNRLIGFVFQ SFNLLPRLNA LDNVALPLSY RGMPRREALE RAEAMLARVG LAERAGHRPA DLSGGQRQRV AIARALVGEP ALILADEPTG NLDASTAKEV LELLLTLNRE RQVTLVVVTH DPSLAARLGR QLTVRHGEVH EDLAEACR
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