| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_60470 |
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| Symbol | ispB |
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| ID | 4385740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 5389330 |
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| End bp | 5390298 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639327479 |
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| Product | octaprenyl-diphosphate synthase |
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| Protein accession | YP_793028 |
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| Protein GI | 116052711 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.456687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.0384277 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCCC AGGCCTTCTA CCGCGTGGTG GCGGAAGATT TCACCGCCGT CGACGGGATC
ATCCGTCGCC AACTCACCTC CCGCGTTCCC CTGGTGGAAA AGATCGGCGA CTACATCATC
TCCGCCGGCG GCAAGCGCCT GCGTCCGCTG CTGGTCCTGC TCGCCGGCAA GACCCTGGGC
TACAAGGGCG ACGACCTCTG CCTGCTGGCC GCCACCATCG AATTCCTGCA CACCTCCACT
CTGCTGCACG ACGACGTCGT CGACGCCTCC GGCCTGCGCC GCGGCCGCTC CACCGCCAAT
GCCCTGTGGG GCAACGCGCC GAGCGTGCTG GTAGGCGACT TCCTTTATGC CCGCTCCTTC
GAAATGATGG TCGAGCTGGG TTCCATGCCG GTCATGCGCA TCATATCCCA GGCCACCCGG
GTGATCGCCG AGGGCGAAGT GCTGCAATTG TCCAAGGTAC GCGACGCCAG CACTACCGAA
GAGACCTACA TGGAAGTGAT CCGCGGCAAG ACCGCGATGC TTTTCGAGGC CTCGACCCAC
AGCGCCGCCG CGCTGTGCCA GGCCGGCGAG GAACAGTCCG AGGCACTGCG CCGCTTCGGC
GACTACCTGG GAATCGCCTT CCAACTGGTG GACGACCTGC TCGACTACCG CGGCGACGCC
GCGACCCTCG GCAAGAACGT CGGCGACGAC CTCGCCGAAG GCAAGCCCAC CCTGCCGCTG
ATCGTCACCA TGCGCGACGG CACCGAGGAG CAGGCCGCGC TGGTACGCAA GGCCATCCAG
CAAGGCGGCA GCCAGGACCT GGAGAGCGTC TGTGCCGCCG TCGAGGCTGC CGGCGCCCTG
GACTATACCG CCAACCTCGC CCGCGACTAC GCCGCCCGCG CCATCGCCTG CCTGGATACG
CTGCCGGACA ACGAATACCG CTCCGCCCTG GTCGAACTCA GCGAATTCGC TGTCGCCCGT
ACCCACTGA
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| Protein sequence | MQPQAFYRVV AEDFTAVDGI IRRQLTSRVP LVEKIGDYII SAGGKRLRPL LVLLAGKTLG
YKGDDLCLLA ATIEFLHTST LLHDDVVDAS GLRRGRSTAN ALWGNAPSVL VGDFLYARSF
EMMVELGSMP VMRIISQATR VIAEGEVLQL SKVRDASTTE ETYMEVIRGK TAMLFEASTH
SAAALCQAGE EQSEALRRFG DYLGIAFQLV DDLLDYRGDA ATLGKNVGDD LAEGKPTLPL
IVTMRDGTEE QAALVRKAIQ QGGSQDLESV CAAVEAAGAL DYTANLARDY AARAIACLDT
LPDNEYRSAL VELSEFAVAR TH
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