Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_60230 |
Symbol | comL |
ID | 4384542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5364428 |
End bp | 5365453 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639327457 |
Product | competence protein ComL |
Protein accession | YP_793006 |
Protein GI | 116052690 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000000000131056 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAGTGA AACACCTGCT GCTGATCGCC ATCCTCGCCC TCACCGCAGC CTGCTCCTCG AACAAGGAGA CTGTCGACGA GAACCTGAGC GAGAGCCAGC TGTACCAGCA GGCGCAGGAC GACCTCAACA ACAAGAGCTA CAACAGCGCC GTCACCAAGC TGAAAGCCCT CGAATCGCGC TATCCCTTCG GCCGCTACGC CGAGCAGGCC CAGCTCGAGC TGATCTACGC CAACTACAAG AACATGGAGC CCGAAGCCGC CCGCGCCGCC GCCGAACGCT TCATCCGCCT GCATCCGCAG CACCCCAACG TCGACTACGC CTACTACCTC AAAGGCCTGT CCTCCTTCGA CCAGGACCGC GGCCTGCTGG CGCGCTTCCT GCCGCTGGAC ATGACCAAGC GCGACCCGGG CGCCGCCCGC GACTCCTTCA ACGAGTTCGC CCAGCTCACC AGCCGCTTCC CCAACAGCCG CTACGCCCCG GACGCCAAGG CGCGCATGGT GTACCTGCGC AACCTGCTGG CGGCCTACGA AGTGCACGTC GGCCACTACT ACCTGAAGCG CCAGGCCTAT GTCGCCGCCG CCAACCGCGG TCGCTACGTG GTGGAGAACT TCCAGGAAAC CCCGGCCGTC GGCGATGGCC TGGCGATCAT GGTCGAAGCC TACCGTCGCC TGGGTCTCGA CGACCTGGCC AGCACCAGCC TGGAAACCCT CAAGCTGAAC TATCCGGATA ACGCCAGCCT CAAGGATGGC GAGTTCGTCG CCCGCGAAAG CGAGGCCGAC ACCCGCTCCT GGCTGGCCAA GGCCACCCTG GGCCTGATCG AAGGCGGCGA GCCGCCGCCG CACATGGAAA CCCAGGCCGC CAAGGACGTG ATCAAGCAGT ACGAGGATGC CGAGCGGGAG ATCCCCGCCG AACTGAAGCC GGAAAACCAG GATCACAGCG CCGACGACGA GAAGCCGGAG AGCGATGACG ACGAGGACTC CGGTCGCTCC TGGTGGAGCT ACATGACCTT CGGTCTCTTC GACTGA
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Protein sequence | MQVKHLLLIA ILALTAACSS NKETVDENLS ESQLYQQAQD DLNNKSYNSA VTKLKALESR YPFGRYAEQA QLELIYANYK NMEPEAARAA AERFIRLHPQ HPNVDYAYYL KGLSSFDQDR GLLARFLPLD MTKRDPGAAR DSFNEFAQLT SRFPNSRYAP DAKARMVYLR NLLAAYEVHV GHYYLKRQAY VAAANRGRYV VENFQETPAV GDGLAIMVEA YRRLGLDDLA STSLETLKLN YPDNASLKDG EFVARESEAD TRSWLAKATL GLIEGGEPPP HMETQAAKDV IKQYEDAERE IPAELKPENQ DHSADDEKPE SDDDEDSGRS WWSYMTFGLF D
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