Gene PA14_60230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_60230 
SymbolcomL 
ID4384542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5364428 
End bp5365453 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content65% 
IMG OID639327457 
Productcompetence protein ComL 
Protein accessionYP_793006 
Protein GI116052690 
COG category[R] General function prediction only 
COG ID[COG4105] DNA uptake lipoprotein 
TIGRFAM ID[TIGR03302] outer membrane assembly lipoprotein YfiO 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000000000131056 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAGTGA AACACCTGCT GCTGATCGCC ATCCTCGCCC TCACCGCAGC CTGCTCCTCG 
AACAAGGAGA CTGTCGACGA GAACCTGAGC GAGAGCCAGC TGTACCAGCA GGCGCAGGAC
GACCTCAACA ACAAGAGCTA CAACAGCGCC GTCACCAAGC TGAAAGCCCT CGAATCGCGC
TATCCCTTCG GCCGCTACGC CGAGCAGGCC CAGCTCGAGC TGATCTACGC CAACTACAAG
AACATGGAGC CCGAAGCCGC CCGCGCCGCC GCCGAACGCT TCATCCGCCT GCATCCGCAG
CACCCCAACG TCGACTACGC CTACTACCTC AAAGGCCTGT CCTCCTTCGA CCAGGACCGC
GGCCTGCTGG CGCGCTTCCT GCCGCTGGAC ATGACCAAGC GCGACCCGGG CGCCGCCCGC
GACTCCTTCA ACGAGTTCGC CCAGCTCACC AGCCGCTTCC CCAACAGCCG CTACGCCCCG
GACGCCAAGG CGCGCATGGT GTACCTGCGC AACCTGCTGG CGGCCTACGA AGTGCACGTC
GGCCACTACT ACCTGAAGCG CCAGGCCTAT GTCGCCGCCG CCAACCGCGG TCGCTACGTG
GTGGAGAACT TCCAGGAAAC CCCGGCCGTC GGCGATGGCC TGGCGATCAT GGTCGAAGCC
TACCGTCGCC TGGGTCTCGA CGACCTGGCC AGCACCAGCC TGGAAACCCT CAAGCTGAAC
TATCCGGATA ACGCCAGCCT CAAGGATGGC GAGTTCGTCG CCCGCGAAAG CGAGGCCGAC
ACCCGCTCCT GGCTGGCCAA GGCCACCCTG GGCCTGATCG AAGGCGGCGA GCCGCCGCCG
CACATGGAAA CCCAGGCCGC CAAGGACGTG ATCAAGCAGT ACGAGGATGC CGAGCGGGAG
ATCCCCGCCG AACTGAAGCC GGAAAACCAG GATCACAGCG CCGACGACGA GAAGCCGGAG
AGCGATGACG ACGAGGACTC CGGTCGCTCC TGGTGGAGCT ACATGACCTT CGGTCTCTTC
GACTGA
 
Protein sequence
MQVKHLLLIA ILALTAACSS NKETVDENLS ESQLYQQAQD DLNNKSYNSA VTKLKALESR 
YPFGRYAEQA QLELIYANYK NMEPEAARAA AERFIRLHPQ HPNVDYAYYL KGLSSFDQDR
GLLARFLPLD MTKRDPGAAR DSFNEFAQLT SRFPNSRYAP DAKARMVYLR NLLAAYEVHV
GHYYLKRQAY VAAANRGRYV VENFQETPAV GDGLAIMVEA YRRLGLDDLA STSLETLKLN
YPDNASLKDG EFVARESEAD TRSWLAKATL GLIEGGEPPP HMETQAAKDV IKQYEDAERE
IPAELKPENQ DHSADDEKPE SDDDEDSGRS WWSYMTFGLF D