| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_60210 |
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| Symbol | rluD |
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| ID | 4384541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 5363320 |
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| End bp | 5364282 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639327456 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_793005 |
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| Protein GI | 116052689 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000000000135219 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGATA TGATTCAACG CGCGGCCGAG GTGCCGTTCG AGCTGGGTGG CCAGCGTCTC
GACCAGATCG CCGCCCAGCT TTTTCCCGAA CACTCCCGCT CCCGTCTGGC CGGCTGGATC
AAGGACGGTC GCCTGACCGT CGACGGCGCC GTGCTGCGCC CGCGCGACAT CGTCCACAGC
GGCGCGCAAC TGGTCCTGGA GGCCGAGCAG GAAGCCCAGG GCGAGTGGCT CGCACAGGAC
ATCGAGCTGG AAATCGTCTA CGAGGACGAG CACATCCTGG TGATTGACAA GCCCGCCGGC
CTGGTGGTCC ATCCGGCTGC CGGCCATCAG GACGGCACCC TGCTGAATGC CTTGCTCTAC
CATGTCCCGG ACATCGCCAA TGTGCCGCGC GCCGGGATCG TCCACCGCCT GGACAAGGAC
ACGACCGGCC TGATGGTAGT GGCCAAGACG CTGGAGGCCC ACACCAAGCT GGTGGCGCAA
CTGCAGGCAC GGTCGGTCAG CCGCATCTAC GAGGCGATCG TGATCGGCGT GATCACCTCC
GGCGGCACCA TCGATGCGCC GATCGGACGG CATGGCGTGC AGCGGCAGAA GATGGCGGTG
GTCGACGCCG GCAAGGTGGC GGTCAGCCAT TACCGCGTGC TGGAACGCTT CCGTGCGCAC
ACCCATACCC GGGTCAAGCT GGAGACCGGG CGTACCCACC AGATCCGCGT GCACATGAGC
CATATTGGCT ATCCCCTGGT CGGCGATCCG GTCTACGGTG GGCGCTTCAG GATTCCCCCG
GTGGCCAGCC AGACCCTGGT CCAGACTCTT CGCGAATTCC CCCGGCAGGC GCTGCACGCG
CGCTTCCTCG AACTGGATCA CCCGGCCACC GGCGTGCGCA TGAAGTGGGA GTCGCCGCTG
CCGGAAGACT TCCTCTGGCT GCTCAGCCTG TTGCGCCAGG ATCGCGAGGC GTTCGTCGGT
TGA
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| Protein sequence | MSDMIQRAAE VPFELGGQRL DQIAAQLFPE HSRSRLAGWI KDGRLTVDGA VLRPRDIVHS
GAQLVLEAEQ EAQGEWLAQD IELEIVYEDE HILVIDKPAG LVVHPAAGHQ DGTLLNALLY
HVPDIANVPR AGIVHRLDKD TTGLMVVAKT LEAHTKLVAQ LQARSVSRIY EAIVIGVITS
GGTIDAPIGR HGVQRQKMAV VDAGKVAVSH YRVLERFRAH THTRVKLETG RTHQIRVHMS
HIGYPLVGDP VYGGRFRIPP VASQTLVQTL REFPRQALHA RFLELDHPAT GVRMKWESPL
PEDFLWLLSL LRQDREAFVG
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