| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_59780 |
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| Symbol | rcsC |
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| ID | 4385472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 5320295 |
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| End bp | 5323549 |
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| Gene Length | 3255 bp |
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| Protein Length | 1084 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639327414 |
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| Product | putative kinase sensor protein |
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| Protein accession | YP_792966 |
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| Protein GI | 116052651 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000030188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 3.75506e-17 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAGTCTG CTAGTGCCTT GGAGCACGAC AACAAACTTT TGCTCAAATG GACAACCCTC
TCGCAGAGCC TGAGCATCGG CTTGATCTGT GTGGTGGTGC TGACCGTATT GCTGTTCAGC
ATCTGTTACT GGTCGCTGGG GAGATTGTTT CAGGAGGAGG AGGACAAAGT CTCCTTCCAC
TTCACCCGTA TGATGGATGT TATACGGGAG CATGAGGTAT TTCTTGGGCG CATCGCTCGA
AAAAGCGACA AGACCACCCA GAAGTACGAC TATGACGTGG TGCCTTTGCA GCGGCACTTG
TTGGCAAAGG AAAACGGATT AGCGGTCTAT GAGGGACGGG AGTTTTCCTT TGCTATGCCA
TTTCTACTGG CTACCAAGCA CGCGTTGAGC GCCGATTCCT CGGGAGATCC GTTTTCGCTC
GGTGTATTGC TCGCCAATTT CTACGGAAGC TTCTGGAGTG TTTCCGCCTA TCCCGCGCCA
CAGTTACTGA TCTTTGATCT TTCCGGCAGC ACCCGCCTGG CAGTGCCGTC GATTCCCTCC
ACAGCGCAGC GTGACAGGTT GAGCGGAAGC TATCCGATGA TAGTCGAGCG CATTCTGGCG
CGCTTGCGCA CCCGGCCGGT GGGGGAGGAC GCTCAGCGTG TCCATTGGAT ACGCGCTGAT
CGCTATCGCG ACTCGGCGCT GGAGATGTTG GGAGTCGCCC GGGTTGATCT GCCGGAAACA
CTCTGGTGGC ACGACGAGCC GAACCATCTG ATCATCGCTG CGAGCCTGCT TGATCTCAGG
CGAATCAATG ACTTCGAACA GTTGGTTGAG CGCCCGGCAT TCGATTCGTA CAGCCTGGTA
TCGCCGGATG GCGAGGTATT GCTCGGCGCG GCCCCTGCGA CCGGCCTGAG GGATGGCCTG
AACCTCACCC GACAGGGGGT CGCCGTTCAA CTGCGCAGCC AGCCTGAGAA CGGCTGGCTC
GCGGTCTACC GAACCGACTA CGGCAATTTC TTTCGCCACT CCCGGTGGCT GGTGGCAGGT
CTGCTGCTGA CCCCGGCGCT GCTCCTGGCC GGTTGGCTCG GGATGCGTTG GTACACCAGC
AGCGTCGTCA ACCCGGTGCA TCGGGCGCAC CGGCAACTGG TGGAGAGCGA CACCTTCAGC
CGGACGCTGA TACAGACCGC GCCGGTGGCT CTGGTGGTGC TGACCCAGGA TGACCAGCAA
CTGGTGACCT GCAACCACTT GGCCGCCCAG TGGCTGGGCG GGCCCACGGA GATCCTTGGG
CTGACTTCCA ACTGGAAGCT TTTCGATGCG CGTGGGCAGG TACCAGGAGA CATCTGTATC
CAGGTCGGTG GGCGCTATTT GCAGACCGCC TTCGCGGCGA CCCGCTATGC CGGCACCGAG
GCGGTACTGT GCGTATTCAA CGACATCACG GTCCACTGCG AGGCGGAGAC CGCGCTGTCC
AATGCGAAGC GAGCAGCGGA TGCCGCCAGC CAGGCCAAGA CCCTGTTCCT GGCCCGCATG
AGCCATGAAA TCCGTACTCC CCTGTACGGT GTCCTTGGCA CCCTGGAGTT GCTCGACCTG
ACCACCCTGA ACGAGCGGCA ACGCGCCTAC CTACGCACCA TCCAGAGTTC GTCTGCGACG
CTCATGCAAC TGATTAGCGA TGTGCTGGAT GTCTCGAAGA TCGAAGCGGG GCAGATGGCT
CTGACCCTGG CCGCCTTCAA TCCGCTGGAC CTAGTGCGGG AAGTGCTTGG CAACTTTGCC
GCCAGCGCCA TGGCCAAGGA CCTGCAGTTC TATGCCTGCA TCGACACCGA AGTGCCGGCG
CAACTGATCG GTGACGTGAC GCGGATTCGC CAGGTGCTCA ATAACTTGGT GAATAACGCG
CTGAAGTTCA CCGATATCGG ACGGGTGGTC CTGCGCGTGA AGTTGCTCTC CCGCAATGAT
GGTCGAGCCC TGTTGCAGTG GCAGGTCGCC GACACCGGTA TCGGTATCGC ACACGAACAG
CAGGAGCGCT TGTTCGAGGC GTTCTACCAG GTTTCGGGAG CGCACCATGC CGGCGGCACG
GGGCTAGGAC TGTCGATCTG CTGGCATCTG GCGGAAATGA TGGGCGGTCA CCTGCGAATG
GTCAGCGAGA CAGGGCTCGG CAGCAGCTTC AGCCTGGTGC TCGAGTTGCC CGAGGACGAA
CAGTCCGGGC TGGCTTGCCG GCCGGGGCTC TTGAAATCCG CTTGCGTCCA TGTGCGCTCG
CCCGTGCGGG AGCTAGCCGA CAGCGTAGGG GCGTGGCTGA AAGCCTGGGG CTGCAAGGTC
AGCAGCGGCG AGGCGGCGCC CTCCGAGCTG GAGACTTGTG TGCTTCTGGA GCTGCTGCCG
ATGGCGGCCG GGCCTGCTTC TTCGCCCTGG CCAGGCCCCC GGGTGCGCGC GTCCATGGAT
GCGCCTTGCC AGCCGGAGCT GCGTGAGGAC GGCTGGCGTG TCGGCCTGCA CAACCTGGCG
GGAATCGGCC AGGCCCTGGC GCAGGCTCTG GGTGGCGATA TCCCCGAGCA AACGCCGGCA
AATGCCTGCG CCCGCTCGGG GAGACTCGAC CTGGAAGTGC TGGTCGCCGA GGACAACCCA
GTCAACCAGG CGCTGCTTCG CGAGCAACTG GAAGAGCTGG GTTGTCGCGT GAGCCTTGCC
GGCGATGGGC GGCAGGCCCT GCAGCTGTTC GACAGTGGTC GCTTCGACCT CCTGCTCAGC
GACGTCAACA TGCCGAACAT GACCGGCTAC GAACTGACCC AGGCGCTGCG CGAACGAGGC
GAGACGCTGC CGATCATCGG CGTGACCGCC AACGCCCTGC GAGAAGAGGG CGAGCGCTGC
CGGGCAGTGG GAATGAACAG TTGGCTGGTG AAGCCGATCA CTCTGCATAC CTTGCATGAA
CTGCTCAGTG AGTTCGCTCG CGCAGGTGTC GTGCTTCCCG CGCAAGCGCG AGACCTCGGC
CCGCCCGCGC AGCTCGACGA CGGTCTCTCA CCGCAGGTGC CGGAACGCAT GCGCGCGCTT
TTCCTTGAGA CCATGGGCAA GGACCTGGAG GCCGCCCGGC AAGCGATTCG CCGCAACGAC
CCGAAGGGGC TGCAGCAGGA CCTGCATCGC ATGGCCGGCT CCCTGGCGGT GATGCGTGCG
CGAACGCTGG TGGTGATGTG TCAGGGCGCC GAGGAAGGCC TGCTGGAGTC GCGCCTTGAA
TGTTCCGCCG TGGAGATTGG CGAGGTGCTC GTTCATATCG AGCAGGCGCT GGAGTTTGTG
AGAAAGACGG GCTGA
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| Protein sequence | MKSASALEHD NKLLLKWTTL SQSLSIGLIC VVVLTVLLFS ICYWSLGRLF QEEEDKVSFH
FTRMMDVIRE HEVFLGRIAR KSDKTTQKYD YDVVPLQRHL LAKENGLAVY EGREFSFAMP
FLLATKHALS ADSSGDPFSL GVLLANFYGS FWSVSAYPAP QLLIFDLSGS TRLAVPSIPS
TAQRDRLSGS YPMIVERILA RLRTRPVGED AQRVHWIRAD RYRDSALEML GVARVDLPET
LWWHDEPNHL IIAASLLDLR RINDFEQLVE RPAFDSYSLV SPDGEVLLGA APATGLRDGL
NLTRQGVAVQ LRSQPENGWL AVYRTDYGNF FRHSRWLVAG LLLTPALLLA GWLGMRWYTS
SVVNPVHRAH RQLVESDTFS RTLIQTAPVA LVVLTQDDQQ LVTCNHLAAQ WLGGPTEILG
LTSNWKLFDA RGQVPGDICI QVGGRYLQTA FAATRYAGTE AVLCVFNDIT VHCEAETALS
NAKRAADAAS QAKTLFLARM SHEIRTPLYG VLGTLELLDL TTLNERQRAY LRTIQSSSAT
LMQLISDVLD VSKIEAGQMA LTLAAFNPLD LVREVLGNFA ASAMAKDLQF YACIDTEVPA
QLIGDVTRIR QVLNNLVNNA LKFTDIGRVV LRVKLLSRND GRALLQWQVA DTGIGIAHEQ
QERLFEAFYQ VSGAHHAGGT GLGLSICWHL AEMMGGHLRM VSETGLGSSF SLVLELPEDE
QSGLACRPGL LKSACVHVRS PVRELADSVG AWLKAWGCKV SSGEAAPSEL ETCVLLELLP
MAAGPASSPW PGPRVRASMD APCQPELRED GWRVGLHNLA GIGQALAQAL GGDIPEQTPA
NACARSGRLD LEVLVAEDNP VNQALLREQL EELGCRVSLA GDGRQALQLF DSGRFDLLLS
DVNMPNMTGY ELTQALRERG ETLPIIGVTA NALREEGERC RAVGMNSWLV KPITLHTLHE
LLSEFARAGV VLPAQARDLG PPAQLDDGLS PQVPERMRAL FLETMGKDLE AARQAIRRND
PKGLQQDLHR MAGSLAVMRA RTLVVMCQGA EEGLLESRLE CSAVEIGEVL VHIEQALEFV
RKTG
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