Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_58580 |
Symbol | |
ID | 4382635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5219801 |
End bp | 5220481 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639327307 |
Product | putative hydroxylase |
Protein accession | YP_792860 |
Protein GI | 116052545 |
COG category | [S] Function unknown |
COG ID | [COG3128] Uncharacterized iron-regulated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00121484 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCTGC ATATTCCCGC CATCTTCACC GCCGAGGAAG TCTCCCGGAT CCGCGCAGCC CTGGAGCAGG CGGAATGGGC CGACGGCAAG GCGACCGCCG GCTACCAATC GGCCAAGGCC AAGCACAACC TGCAACTGCC GCAGGACCAC CCGCTGGCCC GGGAGATCGG CGAAGCCATG CTGCAGCGCC TGTGGAACCA TCCCCTGTTC ATGTCCGCCG CCCTGCCGCT CAAGGTCTTC CCGCCGCTGT TCAACTGCTA TACCGGCGGG GGCTCGTTCG ACTTCCACAT CGACAACGCC GTGCGCGACG TCCATGGCGG CCGCGAGCGG GTCCGTACCG ACCTGTCCTC GACCCTCTTC TTCAGCGACC CGGAGGACTA TGACGGCGGC GAACTGGTGA TCCAGGACAC CTACGGCCTG CAACAGGTGA AGCTGCCCGC CGGCGATCTG GTGCTCTATC CCGGCACCAG CCTGCACAAG GTCAATCCGG TCACCCGCGG CGCGCGCTAC GCCTCGTTCT TCTGGACCCA GAGCCTGGTC CGCGAAGACA GTCAGCGCAC CCTGCTATTC GAAATGGACC AGTCGATCCA GCGACTCACC CACGACGTGC CCGACCATCC CTCGCTGATC CGCCTAACCG GCACCTACCA CAATCTCCTG CGGCGCTGGT CGGAACTCTG A
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Protein sequence | MLLHIPAIFT AEEVSRIRAA LEQAEWADGK ATAGYQSAKA KHNLQLPQDH PLAREIGEAM LQRLWNHPLF MSAALPLKVF PPLFNCYTGG GSFDFHIDNA VRDVHGGRER VRTDLSSTLF FSDPEDYDGG ELVIQDTYGL QQVKLPAGDL VLYPGTSLHK VNPVTRGARY ASFFWTQSLV REDSQRTLLF EMDQSIQRLT HDVPDHPSLI RLTGTYHNLL RRWSEL
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