Gene PA14_58580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_58580 
Symbol 
ID4382635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5219801 
End bp5220481 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content65% 
IMG OID639327307 
Productputative hydroxylase 
Protein accessionYP_792860 
Protein GI116052545 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00121484 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTGC ATATTCCCGC CATCTTCACC GCCGAGGAAG TCTCCCGGAT CCGCGCAGCC 
CTGGAGCAGG CGGAATGGGC CGACGGCAAG GCGACCGCCG GCTACCAATC GGCCAAGGCC
AAGCACAACC TGCAACTGCC GCAGGACCAC CCGCTGGCCC GGGAGATCGG CGAAGCCATG
CTGCAGCGCC TGTGGAACCA TCCCCTGTTC ATGTCCGCCG CCCTGCCGCT CAAGGTCTTC
CCGCCGCTGT TCAACTGCTA TACCGGCGGG GGCTCGTTCG ACTTCCACAT CGACAACGCC
GTGCGCGACG TCCATGGCGG CCGCGAGCGG GTCCGTACCG ACCTGTCCTC GACCCTCTTC
TTCAGCGACC CGGAGGACTA TGACGGCGGC GAACTGGTGA TCCAGGACAC CTACGGCCTG
CAACAGGTGA AGCTGCCCGC CGGCGATCTG GTGCTCTATC CCGGCACCAG CCTGCACAAG
GTCAATCCGG TCACCCGCGG CGCGCGCTAC GCCTCGTTCT TCTGGACCCA GAGCCTGGTC
CGCGAAGACA GTCAGCGCAC CCTGCTATTC GAAATGGACC AGTCGATCCA GCGACTCACC
CACGACGTGC CCGACCATCC CTCGCTGATC CGCCTAACCG GCACCTACCA CAATCTCCTG
CGGCGCTGGT CGGAACTCTG A
 
Protein sequence
MLLHIPAIFT AEEVSRIRAA LEQAEWADGK ATAGYQSAKA KHNLQLPQDH PLAREIGEAM 
LQRLWNHPLF MSAALPLKVF PPLFNCYTGG GSFDFHIDNA VRDVHGGRER VRTDLSSTLF
FSDPEDYDGG ELVIQDTYGL QQVKLPAGDL VLYPGTSLHK VNPVTRGARY ASFFWTQSLV
REDSQRTLLF EMDQSIQRLT HDVPDHPSLI RLTGTYHNLL RRWSEL