Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_58100 |
Symbol | cafA |
ID | 4382599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5172233 |
End bp | 5173690 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639327269 |
Product | cytoplasmic axial filament protein |
Protein accession | YP_792822 |
Protein GI | 116052509 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAG AGATCCTGAT CAATATCACG CCGATGGAGT CGCGCGTGGC GGTGGTGGAA AACGGCGTCC TGCAGGAAGT GCATGTCGAA CGCACCCAGC GGCGCGGCAT CGTCGGCAAT ATCTACAAGG GGCGGGTGGT ACGGGTACTG CCGGGGATGC AGGCGGCGTT CGTCGACATC GGCCTGGAAC GTGCGGCGTT CATCCATGCC GCCGAGATAT CCAATCGCGA AGGCAGCGCT GTGGAAAGCA TCAGTGCCCT GGTCCATGAG GGGCAGGCGC TGGTGGTGCA GGTGACCAAG GATCCGATCG GCACCAAGGG CGCACGGCTG ACCACCCACC TGTCGATTCC TTCGCGCTAT CTGGTGTACA TGCCGCGCAC CAGCCATGTC GGGATATCCC TGCGGATCGA GGACGAAGTC GAGCGCGAGC GCCTGAAGAA GGTGGTGGCC GACTGCGTGG CGGCGGAAGG CATCGAGGGG CAGGGCGGCT TCATTCTGCG CACCGCCGCG GAAGGTGCGG GCGAGGACGA GATTCTCGCC GACATCCGCT ACCTTCGCCG GCTATGGGAC CAGATCGCCG CGCAGATCCA GACCGTCGGC GCGCCTTCGG TGATCTACGA AGACCTGTCC CTGGCGATCC GTACCCTGCG CGACCTGGTG AACCCGCGGA TCGAGAAGAT CCGCATCGAC TCGCGAGAGA ACTTCCAGAA GATCACTTCC TTCGTCGAAG AATTGATGCC GGAGATTTCC GATCGCCTCG AACATTACCC GGGCGAGCGA CCGATCTTCG ATCTCTACGG CGTCGAGGAC GAAATCCAGA AAGCCCTGGA GCGCAAGGTA CTGCTGAAGT CCGGCGGCTA CCTGATCGTC GATCCGACCG AGGCGATGAC CACCATCGAC GTGAACACCG GCGCCTTCGT CGGCCATCGC AACCTCGAGG AAACCATCTT CAAGACCAAC CTCGAGGCGG CCACCGCGAT CGCCCGCCAA CTGCGCCTGC GCAACCTGGG CGGGATCATC ATCATCGACT TCATCGACAT GGAGGACGAG GAGCATCGCC GGCAGGTCCT GCGCACCCTG GAGAAGCAAC TGGAGCGCGA CCACGCGAAG ACCAACATCA TCGGCATCAC CGAGTTGGGC CTGGTGCAGA TGACCCGCAA GCGCACCCGC GAAAGCCTGG TGCAGATCCT TTGCGAGCCG TGTCCCTGCT GTCAGGGACG CGGCATGCTG AAGACTGCGG AAACCACCTG CTACGAGATT TTCCGCGAGA TTCTCCGCGA GGCACGTGCC TACCAGGCCG ACTCCTACCT GGTGCTGGCC AACCAGAAGG TGGTGGACCG GCTGCTCGAC GAGGAGTCGG GTAACGTCGC CGATCTCGAG GCGTTCATCG GCCGCACCAT CAAGTTCCAG GTCGAGGCGA TGTACTCGCA GGAGCAATAT GACGTGGTCC TGCTCTGA
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Protein sequence | MSEEILINIT PMESRVAVVE NGVLQEVHVE RTQRRGIVGN IYKGRVVRVL PGMQAAFVDI GLERAAFIHA AEISNREGSA VESISALVHE GQALVVQVTK DPIGTKGARL TTHLSIPSRY LVYMPRTSHV GISLRIEDEV ERERLKKVVA DCVAAEGIEG QGGFILRTAA EGAGEDEILA DIRYLRRLWD QIAAQIQTVG APSVIYEDLS LAIRTLRDLV NPRIEKIRID SRENFQKITS FVEELMPEIS DRLEHYPGER PIFDLYGVED EIQKALERKV LLKSGGYLIV DPTEAMTTID VNTGAFVGHR NLEETIFKTN LEAATAIARQ LRLRNLGGII IIDFIDMEDE EHRRQVLRTL EKQLERDHAK TNIIGITELG LVQMTRKRTR ESLVQILCEP CPCCQGRGML KTAETTCYEI FREILREARA YQADSYLVLA NQKVVDRLLD EESGNVADLE AFIGRTIKFQ VEAMYSQEQY DVVLL
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