Gene PA14_58100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_58100 
SymbolcafA 
ID4382599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5172233 
End bp5173690 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content63% 
IMG OID639327269 
Productcytoplasmic axial filament protein 
Protein accessionYP_792822 
Protein GI116052509 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1530] Ribonucleases G and E 
TIGRFAM ID[TIGR00757] ribonuclease, Rne/Rng family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG AGATCCTGAT CAATATCACG CCGATGGAGT CGCGCGTGGC GGTGGTGGAA 
AACGGCGTCC TGCAGGAAGT GCATGTCGAA CGCACCCAGC GGCGCGGCAT CGTCGGCAAT
ATCTACAAGG GGCGGGTGGT ACGGGTACTG CCGGGGATGC AGGCGGCGTT CGTCGACATC
GGCCTGGAAC GTGCGGCGTT CATCCATGCC GCCGAGATAT CCAATCGCGA AGGCAGCGCT
GTGGAAAGCA TCAGTGCCCT GGTCCATGAG GGGCAGGCGC TGGTGGTGCA GGTGACCAAG
GATCCGATCG GCACCAAGGG CGCACGGCTG ACCACCCACC TGTCGATTCC TTCGCGCTAT
CTGGTGTACA TGCCGCGCAC CAGCCATGTC GGGATATCCC TGCGGATCGA GGACGAAGTC
GAGCGCGAGC GCCTGAAGAA GGTGGTGGCC GACTGCGTGG CGGCGGAAGG CATCGAGGGG
CAGGGCGGCT TCATTCTGCG CACCGCCGCG GAAGGTGCGG GCGAGGACGA GATTCTCGCC
GACATCCGCT ACCTTCGCCG GCTATGGGAC CAGATCGCCG CGCAGATCCA GACCGTCGGC
GCGCCTTCGG TGATCTACGA AGACCTGTCC CTGGCGATCC GTACCCTGCG CGACCTGGTG
AACCCGCGGA TCGAGAAGAT CCGCATCGAC TCGCGAGAGA ACTTCCAGAA GATCACTTCC
TTCGTCGAAG AATTGATGCC GGAGATTTCC GATCGCCTCG AACATTACCC GGGCGAGCGA
CCGATCTTCG ATCTCTACGG CGTCGAGGAC GAAATCCAGA AAGCCCTGGA GCGCAAGGTA
CTGCTGAAGT CCGGCGGCTA CCTGATCGTC GATCCGACCG AGGCGATGAC CACCATCGAC
GTGAACACCG GCGCCTTCGT CGGCCATCGC AACCTCGAGG AAACCATCTT CAAGACCAAC
CTCGAGGCGG CCACCGCGAT CGCCCGCCAA CTGCGCCTGC GCAACCTGGG CGGGATCATC
ATCATCGACT TCATCGACAT GGAGGACGAG GAGCATCGCC GGCAGGTCCT GCGCACCCTG
GAGAAGCAAC TGGAGCGCGA CCACGCGAAG ACCAACATCA TCGGCATCAC CGAGTTGGGC
CTGGTGCAGA TGACCCGCAA GCGCACCCGC GAAAGCCTGG TGCAGATCCT TTGCGAGCCG
TGTCCCTGCT GTCAGGGACG CGGCATGCTG AAGACTGCGG AAACCACCTG CTACGAGATT
TTCCGCGAGA TTCTCCGCGA GGCACGTGCC TACCAGGCCG ACTCCTACCT GGTGCTGGCC
AACCAGAAGG TGGTGGACCG GCTGCTCGAC GAGGAGTCGG GTAACGTCGC CGATCTCGAG
GCGTTCATCG GCCGCACCAT CAAGTTCCAG GTCGAGGCGA TGTACTCGCA GGAGCAATAT
GACGTGGTCC TGCTCTGA
 
Protein sequence
MSEEILINIT PMESRVAVVE NGVLQEVHVE RTQRRGIVGN IYKGRVVRVL PGMQAAFVDI 
GLERAAFIHA AEISNREGSA VESISALVHE GQALVVQVTK DPIGTKGARL TTHLSIPSRY
LVYMPRTSHV GISLRIEDEV ERERLKKVVA DCVAAEGIEG QGGFILRTAA EGAGEDEILA
DIRYLRRLWD QIAAQIQTVG APSVIYEDLS LAIRTLRDLV NPRIEKIRID SRENFQKITS
FVEELMPEIS DRLEHYPGER PIFDLYGVED EIQKALERKV LLKSGGYLIV DPTEAMTTID
VNTGAFVGHR NLEETIFKTN LEAATAIARQ LRLRNLGGII IIDFIDMEDE EHRRQVLRTL
EKQLERDHAK TNIIGITELG LVQMTRKRTR ESLVQILCEP CPCCQGRGML KTAETTCYEI
FREILREARA YQADSYLVLA NQKVVDRLLD EESGNVADLE AFIGRTIKFQ VEAMYSQEQY
DVVLL