| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_56890 |
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| Symbol | |
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| ID | 4382479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 5068199 |
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| End bp | 5071255 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639327167 |
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| Product | multidrug efflux protein |
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| Protein accession | YP_792720 |
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| Protein GI | 116052409 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTTA CCGATCCGTT CATCCGTCGT CCGGTCCTGG CGAGCGTGGT CAGCCTGCTG
ATCGTCCTGC TCGGCATGCA GGCCTTCAGC AAGCTGGTGA TCCGCGAGTA TCCGCAAATG
GAGAACGCGC TGATCACGGT GACCACGCTC TACGCCGGAG CCAACGCGGA GACCATCCAG
GGCTACATCA CCCAGCCGCT GCAGCAGAGC CTGGCCAGCG CCGAAGGCAT CGACTACATG
ACCTCGGTGA GCCGGCAGAA CTATTCGACC ATCTCCATCT ACGCGCGGAT CGGCGCCAAT
ACCGATCGCC TGGTCACCGA GCTGCTGGCC AAGTCCAACG AAGTGAAGAG CCAACTGCCG
CCGGACGCCG AGGACCCGGT GCTGCAGAAG GAGGCCGCGG ATGCCTCGGC GCTGATGTAC
ATCAGCTTCT ACAGCGAGCA GATGAACAAC CCGCAGATCA CCGACTACCT GTCGCGGGTG
ATCCAGCCCA AGCTGGCGAC CCTGCCCGGT ATCGCCGAGG CGGAGATCCT CGGCAACCAG
GTGTTCGCCA TGCGCCTGTG GCTGGACCCG GTGAAGATGG CCGCGTTCGG CGTCACCGCC
GGCGAGATCA ACCAGGCGGT GCAGCAGTAC AACTTCCTCG CCGCCGCCGG CGAGGTGAAG
GGCCAGTTGG TGGTCACCAG CGTCAATGCT TCCACCGACC TCAAGTCGCC CCAGGCCTTC
GCCGCCATCC CGGTGAAGAC CGACGGCGAC CGCCGGGTGC TGATGGGCGA TGTCGCACGG
GTCGAACTGG GCGCCGCCAG CTACGACGCG ATCAGTTCGT TCAATGGGAT TCCCTCGGTC
TACATCGGCA TCAAGGGCAC GCCCAGCGCC AACCCGCTGG ACGTGATCAA GGAAGTGCGG
GCGAAGATGC CCGAACTGGA AGAGCAATTG CCGCCCAACC TCAAGGTGTC CATCGCCTAC
GACGCCACGC GCTTCATCCA GGCCTCCATC GACGAAGTGG TGAAGACCCT CGGCGAGGCG
GTGCTGATCG TCATCGTGGT GGTGTTCCTG TTCCTCGGCG CGTTCCGTTC GGTACTGATC
CCGGTGGTGA CCATTCCGCT GTCGATGATC GGCGTGTTGT TCTTCATGCA GGCCATGGGC
TACTCGATCA ACCTGCTGAC CCTGCTGGCG ATGGTCCTGG CCATCGGCCT GGTGGTGGAC
GACGCGATCG TGGTGGTGGA AAACATCCAC CGCCACATCG AGGAGGGCAA GCCGCCCTTC
GAGGCCGCCC TGGAGGGCGC GCGGGAGATC GCCGTGCCGG TGGTCAGCAT GACCATCACC
CTCGCCGCGG TCTACGCGCC GATCGGCTTT CTCACCGGCC TCACCGGCGC CCTGTTCAAG
GAATTCGCCT TCACCCTGGC CGGCGCGGTG ATCATTTCCG GGATCGTCGC CCTGACCCTG
TCGCCGATGA TGTGCTCGCG CCTGTTGCGC CACGAGGAGA ATCCCTCGGG CCTGGCGCAT
CGCCTCGACC TGATCTTCGA GGGCCTGAAG CGACGCTACC AGCGCGCCCT CCACGGCACC
CTGGACACCC GTCCGGTGGT CCTGGTGTTC GCCGTGCTGG TACTGGCGCT GATCCCGGTA
CTGCTGATGT TCACCAAGAA GGAGCTGGCG CCGGAAGAGG ACCAGGGCAT CGTGTTCCTC
ATGACCAACT CGCCGCAGAC CGCCAACCTC GACTACCTGA ATCGCTATAC CGCCGAGTTC
GAAGGCATCT TCCGCAGCTT CCCGGAGTAT TACTCGGCGT TCCAGATCAA CGGCTACAAC
GGCGTCCAGG CCGGCATCGG CGGCATGCTG CTCAAGCCCT GGGACGAACG CGAAAAGAGC
CAGATGGAAT TGCTCCATGC GGTGCAGGCG AAGCTCAACG AGATTCCCGG CGTGCAGATC
TTCGCCTTCA ACCTGCCGTC GCTACCGGGC ACCGGCGAGG GCCTGCCATT CCAGTTCGTG
CTCAACACCG CCAACGACTA CGAGTCGCTG CTGCAAGTGG CGCAACGGGT GAAGCAGCGC
GCCAGCGAGT CCGGCAAGTT CGCCTTCCTC GATCTCGACC TGGCGTTCGA CAAACCCGAG
CTGGTGGTCG ACATCGACCG CGAGAAGGCC GCGCAGATGG GCGTCTCCAT GCAGGACCTG
GGGGTGGCGC TGGCCAGCCT GCTCGGCGAG GGCGAGATCA ACCGCTTCAC CATCGACGGG
CGCAGCTACA AGGTCATCGC CCAGGTCGAA CGCCCCTATC GCGACAATCC CGGCTGGCTC
GGCAGCTACT ACGTGAAGAG CCGCAACGGC CAACTGGTCG CCCTCTCGAC CCTGATCGAG
ACCCACGAAC GGGCACGGCC GCGGCAACTG AACCAGTTCC AGCAGCTCAA CTCGGCGATC
ATCTCCGGCT TCCCCATCGT CAGCATGGGC GAGGCCATCG AGACGGTTCA GCAGATCGCC
CGCGAGGAGG CCCCGCGCGG CTTCGCCGTC GACTACGCCG GCGCTTCCCG GCAATACGTG
CAGGAAGGCA GCGCATTGCT GGTCACCTTC GGACTGGCCC TGGCGATCAT CTTCCTGGTC
CTCGCCGCAC AGTTCGAAAG CTTCCGCGAT CCGCTGGTGA TCATGGTCAC CGTGCCGCTG
TCGATCTGCG GTGCGCTGAT ACCGCTGTTC CTCGGCGTGT CGAGCCTGAA CATCTATACC
CAGGTCGGCC TGGTGACACT GATCGGCCTG ATCAGCAAAC ACGGCATCCT GATCGTCGAG
TTCGCCAACC AGTTGCGCCA CGAACAGGGG CTGGGGCGTC GCGAGGCCAT CGAGCAGGCC
GCCGCGATCC GCCTGCGGCC GGTACTGATG ACCACCGCGG CGATGGTGCT CGGGGTGATC
CCACTGATCC TCGCCACCGG CGCCGGGGCG GTCAGTCGCT TCGACATCGG CATCGTGATC
GCTACCGGCA TGTCGGTGGG CACCCTCTTC ACCCTGTTCG TCCTGCCGTG CATCTACACC
CTGGTGGCCA GGCCGGATGC CCCGCCAGGC GTGACGCAAG CGGCAAACGC ACACTGA
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| Protein sequence | MAFTDPFIRR PVLASVVSLL IVLLGMQAFS KLVIREYPQM ENALITVTTL YAGANAETIQ
GYITQPLQQS LASAEGIDYM TSVSRQNYST ISIYARIGAN TDRLVTELLA KSNEVKSQLP
PDAEDPVLQK EAADASALMY ISFYSEQMNN PQITDYLSRV IQPKLATLPG IAEAEILGNQ
VFAMRLWLDP VKMAAFGVTA GEINQAVQQY NFLAAAGEVK GQLVVTSVNA STDLKSPQAF
AAIPVKTDGD RRVLMGDVAR VELGAASYDA ISSFNGIPSV YIGIKGTPSA NPLDVIKEVR
AKMPELEEQL PPNLKVSIAY DATRFIQASI DEVVKTLGEA VLIVIVVVFL FLGAFRSVLI
PVVTIPLSMI GVLFFMQAMG YSINLLTLLA MVLAIGLVVD DAIVVVENIH RHIEEGKPPF
EAALEGAREI AVPVVSMTIT LAAVYAPIGF LTGLTGALFK EFAFTLAGAV IISGIVALTL
SPMMCSRLLR HEENPSGLAH RLDLIFEGLK RRYQRALHGT LDTRPVVLVF AVLVLALIPV
LLMFTKKELA PEEDQGIVFL MTNSPQTANL DYLNRYTAEF EGIFRSFPEY YSAFQINGYN
GVQAGIGGML LKPWDEREKS QMELLHAVQA KLNEIPGVQI FAFNLPSLPG TGEGLPFQFV
LNTANDYESL LQVAQRVKQR ASESGKFAFL DLDLAFDKPE LVVDIDREKA AQMGVSMQDL
GVALASLLGE GEINRFTIDG RSYKVIAQVE RPYRDNPGWL GSYYVKSRNG QLVALSTLIE
THERARPRQL NQFQQLNSAI ISGFPIVSMG EAIETVQQIA REEAPRGFAV DYAGASRQYV
QEGSALLVTF GLALAIIFLV LAAQFESFRD PLVIMVTVPL SICGALIPLF LGVSSLNIYT
QVGLVTLIGL ISKHGILIVE FANQLRHEQG LGRREAIEQA AAIRLRPVLM TTAAMVLGVI
PLILATGAGA VSRFDIGIVI ATGMSVGTLF TLFVLPCIYT LVARPDAPPG VTQAANAH
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