Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_56640 |
Symbol | |
ID | 4382459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5045954 |
End bp | 5047120 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639327147 |
Product | putative MFS transporter |
Protein accession | YP_792700 |
Protein GI | 116052389 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCGT CTCTTCTCGT CCTCGCTTTA TCCGCCTTTG CCATCGGTAC CACCGAATTC GTCATCATGG GCCTGCTGCC GCAGGTCGCC GGCGACCTGC GGGTATCCAT TCCCAGCGCC GGCTGGCTGA TCAGCGGCTA CGCCTTCGCC GTGGCCTTCG GCGCCCCGCT GATGGCCATG GCCACCGCCC GCCTGGAACG CAAGAAAGCC CTGCTCGCGC TGATGGGCAT CTTCATCGTC GGCAACCTGC TCTGCGCGGT GGCCGCCAAC TACGGCCTGC TGATGCTGGC GCGGATCGTC ACCGCGCTCT GCCATGGCGC CTTCTTCGGC ATCGGCTCGG TGGTCGCCGC CAGCCTGGTG GCGCCGAACC GCCGCGCTTC CGCCGTGGCC CTGATGTTCA CCGGCCTGAC CCTGGCCAAC GTGCTCGGCG TGCCGCTGGG TACCGCGCTC GGCCAGGAAG CCGGCTGGCG CGCGACCTTC TGGGTGGTGA CCCTGATCGG CGTGGTCGCC TTCGTCGGCC TGGCCAGGGT GCTGCCAAAC GACCGCGAGG AAGAGAAGGT CGACCTGCGC CAGGAAATGT CCGCGCTGAA GAACCCGTCG CTGTGGCTGG CCCTGGGCAC CACCGTGCTG TTCGCCGCCT CGATGTTCGC CCTGTTCACC TACGTCGCGC CGCTGCTCGG CGAAGTCACC GGGGTCAGCC CGCGCGGCGT GACCTGGACC CTGCTGCTGA TCGGCGTCGG CCTGACCGTC GGCAACGTGA TCGGCGGCCG CCTCGCCGAC TGGCGCCTGG GCACCACCAT GGCCGCGGTG TTCGCCGCCA TGGCGCTGGT CTCGGCGCTG TTCAGCTGGA CCAGCCAGGC CCTGCTGCCG GCGGAGATCA CCCTGTTCTT CTGGGCCGCC GCCGCCTTCG CCGCGGTGCC CGCGCTGCAG GTCAACGTGG TCCGCGTCGG GCATGCCGCG CCGAACCTGG TGGCGACCCT GAACATCGGC GCCTTCAACG TCGGCAACGC GCTCGGCGCC TGGGTCGGCG GCAGCGTCAT CGACCACGGC CTGGGCCTGA CCCGCGTGCC GCTGGCCGCC GCCGCGCTGG CCGCGCTGGC GCTGCTGGCC ACCCTGATCG CCTTTTCCGG AAACGGCCGC GCCCAGGCGC AGCCGGTCCT CGATTGA
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Protein sequence | MPASLLVLAL SAFAIGTTEF VIMGLLPQVA GDLRVSIPSA GWLISGYAFA VAFGAPLMAM ATARLERKKA LLALMGIFIV GNLLCAVAAN YGLLMLARIV TALCHGAFFG IGSVVAASLV APNRRASAVA LMFTGLTLAN VLGVPLGTAL GQEAGWRATF WVVTLIGVVA FVGLARVLPN DREEEKVDLR QEMSALKNPS LWLALGTTVL FAASMFALFT YVAPLLGEVT GVSPRGVTWT LLLIGVGLTV GNVIGGRLAD WRLGTTMAAV FAAMALVSAL FSWTSQALLP AEITLFFWAA AAFAAVPALQ VNVVRVGHAA PNLVATLNIG AFNVGNALGA WVGGSVIDHG LGLTRVPLAA AALAALALLA TLIAFSGNGR AQAQPVLD
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