Gene PA14_56640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_56640 
Symbol 
ID4382459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5045954 
End bp5047120 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content71% 
IMG OID639327147 
Productputative MFS transporter 
Protein accessionYP_792700 
Protein GI116052389 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCGT CTCTTCTCGT CCTCGCTTTA TCCGCCTTTG CCATCGGTAC CACCGAATTC 
GTCATCATGG GCCTGCTGCC GCAGGTCGCC GGCGACCTGC GGGTATCCAT TCCCAGCGCC
GGCTGGCTGA TCAGCGGCTA CGCCTTCGCC GTGGCCTTCG GCGCCCCGCT GATGGCCATG
GCCACCGCCC GCCTGGAACG CAAGAAAGCC CTGCTCGCGC TGATGGGCAT CTTCATCGTC
GGCAACCTGC TCTGCGCGGT GGCCGCCAAC TACGGCCTGC TGATGCTGGC GCGGATCGTC
ACCGCGCTCT GCCATGGCGC CTTCTTCGGC ATCGGCTCGG TGGTCGCCGC CAGCCTGGTG
GCGCCGAACC GCCGCGCTTC CGCCGTGGCC CTGATGTTCA CCGGCCTGAC CCTGGCCAAC
GTGCTCGGCG TGCCGCTGGG TACCGCGCTC GGCCAGGAAG CCGGCTGGCG CGCGACCTTC
TGGGTGGTGA CCCTGATCGG CGTGGTCGCC TTCGTCGGCC TGGCCAGGGT GCTGCCAAAC
GACCGCGAGG AAGAGAAGGT CGACCTGCGC CAGGAAATGT CCGCGCTGAA GAACCCGTCG
CTGTGGCTGG CCCTGGGCAC CACCGTGCTG TTCGCCGCCT CGATGTTCGC CCTGTTCACC
TACGTCGCGC CGCTGCTCGG CGAAGTCACC GGGGTCAGCC CGCGCGGCGT GACCTGGACC
CTGCTGCTGA TCGGCGTCGG CCTGACCGTC GGCAACGTGA TCGGCGGCCG CCTCGCCGAC
TGGCGCCTGG GCACCACCAT GGCCGCGGTG TTCGCCGCCA TGGCGCTGGT CTCGGCGCTG
TTCAGCTGGA CCAGCCAGGC CCTGCTGCCG GCGGAGATCA CCCTGTTCTT CTGGGCCGCC
GCCGCCTTCG CCGCGGTGCC CGCGCTGCAG GTCAACGTGG TCCGCGTCGG GCATGCCGCG
CCGAACCTGG TGGCGACCCT GAACATCGGC GCCTTCAACG TCGGCAACGC GCTCGGCGCC
TGGGTCGGCG GCAGCGTCAT CGACCACGGC CTGGGCCTGA CCCGCGTGCC GCTGGCCGCC
GCCGCGCTGG CCGCGCTGGC GCTGCTGGCC ACCCTGATCG CCTTTTCCGG AAACGGCCGC
GCCCAGGCGC AGCCGGTCCT CGATTGA
 
Protein sequence
MPASLLVLAL SAFAIGTTEF VIMGLLPQVA GDLRVSIPSA GWLISGYAFA VAFGAPLMAM 
ATARLERKKA LLALMGIFIV GNLLCAVAAN YGLLMLARIV TALCHGAFFG IGSVVAASLV
APNRRASAVA LMFTGLTLAN VLGVPLGTAL GQEAGWRATF WVVTLIGVVA FVGLARVLPN
DREEEKVDLR QEMSALKNPS LWLALGTTVL FAASMFALFT YVAPLLGEVT GVSPRGVTWT
LLLIGVGLTV GNVIGGRLAD WRLGTTMAAV FAAMALVSAL FSWTSQALLP AEITLFFWAA
AAFAAVPALQ VNVVRVGHAA PNLVATLNIG AFNVGNALGA WVGGSVIDHG LGLTRVPLAA
AALAALALLA TLIAFSGNGR AQAQPVLD