Gene PA14_56560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_56560 
Symbol 
ID4382454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5042340 
End bp5043095 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content70% 
IMG OID639327142 
Producthypothetical protein 
Protein accessionYP_792695 
Protein GI116052384 
COG category[R] General function prediction only 
COG ID[COG3176] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.492473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA CCGCCATTAC CCGCGAACCC GTCGCCGGAC GCCGCCTGAA GGCCGAGCGC 
CTGAACGGCG CCCGCGCCCT GCGCGAGGCC CAGGCCCTGC GCTACCGCGT ATTCAGCGCC
GAGTTCGACG CCAAGCTCGA AGGCGCCGAA GACGGCCTCG ACCGCGACGA CTACGACCGT
CACTGCGCAC ACATCGGCGT CCGCGACCTC GACAGCGGCG CCCTGGTGGC CACCACCCGG
CTGCTCGACC ATCGCGCCGC CGAACGCCTC GGGCGCTTCT ACAGCGAAGA GGAGTTCCAC
CTCTCCGGCC TCGACGCCCT GCACGGCCCG GTCCTGGAGA TCGGCCGCAC CTGCGTCGCT
CCCGAATACC GCAACGGCGC CACCATCGCG GTACTCTGGG GCGAACTCGC CGAGGTCCTC
AACGAGGGCG GCTACCGCTA CCTGATGGGC TGCGCCAGCA TTCCCATGCG CGACGGCGGT
ATGCAGGCCA AGGCGGTGAT GCAGCGGCTG CGCGAACGCT ACCTGTGCAC CGACTACCTG
CAGGCCGAGC CGAAGAACCC GCTGCCGCCG CTGGACGTCC CGGAAAACCT CACCGCCGAG
CTGCCGCCGC TGCTCAAGGC CTACATGCGC CTGGGCGCGA AGATCTGCGG CGAGCCCTGC
TGGGACCCGG ATTTCCAGGT CGCCGACGTG TTCATCCTGC TCAAGCGCGA CGAACTCTGC
CCGCGCTACG CCCGCCACTT CAAGGCGGCG GTCTGA
 
Protein sequence
MTQTAITREP VAGRRLKAER LNGARALREA QALRYRVFSA EFDAKLEGAE DGLDRDDYDR 
HCAHIGVRDL DSGALVATTR LLDHRAAERL GRFYSEEEFH LSGLDALHGP VLEIGRTCVA
PEYRNGATIA VLWGELAEVL NEGGYRYLMG CASIPMRDGG MQAKAVMQRL RERYLCTDYL
QAEPKNPLPP LDVPENLTAE LPPLLKAYMR LGAKICGEPC WDPDFQVADV FILLKRDELC
PRYARHFKAA V