Gene PA14_56220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_56220 
Symbol 
ID4382413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5019403 
End bp5020317 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content68% 
IMG OID639327120 
Producthypothetical protein 
Protein accessionYP_792673 
Protein GI116052362 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC ATAACCTGCT GGTGGTCGTC GATCCGAGCA GCGACGAACA GCCGGCCCTT 
ACCCGTGCCC AGTGGATCGC CGAACGCAGC GGCGCCAGCG TCGAGTTGCT GCTGTGCGAC
TTCAACCCGG CGCTGGACGG CGGGCTGTTC TTCGACAGTC ACTCGCTGCA GCGTGCCCGC
GACCTTTACC TGGACGAACG GGTCACCTGG CTGGAGCAGC TTTCCATGCC GCTGCAGCAG
GCCGGCATCC GCACTCAGGT CGAGGCCCAG TGGGGCAAGC CGCTGGACCG TATGGTCCTG
CAACGGGTCG GCGAAACCCG GCCCGACCTG GTCCTCAAGA GCACCCGCAA GCACAACCTG
CTGCGCCGCC TGCTACTGGG CAACAGCGAC TGGCAATTGA TCCGCCACTG CCCGCAGCCG
CTCTGGCTGG TCCATCACGA CGCCTGGCGC GGCCAGCGCC TGTGCGCGGC GCTCGACCCA
CTGCATGCCA GCGACAAGCC GGCCGCCCTC GATCACCGGC TGATCGCCGC CGCCCGCCAG
CTCGAAGCCA GCCTGGGGCT GCGCGCCGAC TACCTGCATA CCCACGCGGC GATGCCGCGC
AGCCTGCTGT TCGACGCGGA AATGCTCGCC GGCTACGAGC GTTTCGTGCT GCAACATGAG
GAACGTCACC GCCAGGCCTT CGACGACCTG CTGGCGGCCT ACCCGGAGAT CGCCGCGGAG
CGCCGCCACC TGCTGGCCGG CTATGCCGAG CAGGCGATCC CCGACTTCGT CCGGGCCAAC
GACATCGACC TGTTGCTGAT GGGCGCGGTC GCCCGGGGGC ACCTGGACAA CGCGCTGATC
GGGCAGACCG CCGAACGCGT CCTGGAGGAG GTGGAATGCG ACCTGCTGGT GCTCAAACCG
ACAAATGACA TCTGA
 
Protein sequence
MNLHNLLVVV DPSSDEQPAL TRAQWIAERS GASVELLLCD FNPALDGGLF FDSHSLQRAR 
DLYLDERVTW LEQLSMPLQQ AGIRTQVEAQ WGKPLDRMVL QRVGETRPDL VLKSTRKHNL
LRRLLLGNSD WQLIRHCPQP LWLVHHDAWR GQRLCAALDP LHASDKPAAL DHRLIAAARQ
LEASLGLRAD YLHTHAAMPR SLLFDAEMLA GYERFVLQHE ERHRQAFDDL LAAYPEIAAE
RRHLLAGYAE QAIPDFVRAN DIDLLLMGAV ARGHLDNALI GQTAERVLEE VECDLLVLKP
TNDI